RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 DEFB123Q8N688 67 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 SLC17A8Q8NDX2 589 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 ATG4CQ96DT6 458 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 ECHDC1Q9NTX5 307 aa16.55■□□□□ 0.24
PTPRE-203ENST00000442830 PRKAB2O43741 272 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 EEF2P13639 858 aaKnown RBP16.54■□□□□ 0.24
PTPRE-203ENST00000442830 GNAT2P19087 354 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 KCTD2Q14681 263 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 MSL3Q8N5Y2 521 aaKnown RBP16.54■□□□□ 0.24
PTPRE-203ENST00000442830 MAML3Q96JK9 1138 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 MMP19Q99542 508 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 SYNPO2Q9UMS6 1093 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 MYH4Q9Y623 1939 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 COL6A3P12111 3177 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
PTPRE-203ENST00000442830 COBLO75128 1261 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 RTP1P59025 263 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
PTPRE-203ENST00000442830 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 SIAH1Q8IUQ4 282 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 TRPV1Q8NER1 839 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
PTPRE-203ENST00000442830 VWA5AO00534 786 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 RARBP10826 455 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 STAT3P40763 770 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-203ENST00000442830 EVX2Q03828 476 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 TMEM132BQ14DG7 1078 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 SNX17Q15036 470 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 RNF180Q86T96 592 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 KBTBD3Q8NAB2 608 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 APPBP2Q92624 585 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 NYAP2Q9P242 653 aa16.52■□□□□ 0.24
PTPRE-203ENST00000442830 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
PTPRE-203ENST00000442830 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
PTPRE-203ENST00000442830 GJC2Q5T442 439 aaPredicted RBP16.51■□□□□ 0.23
PTPRE-203ENST00000442830 SLC39A5Q6ZMH5 540 aa16.51■□□□□ 0.23
PTPRE-203ENST00000442830 STRBPQ96SI9 672 aaKnown RBP16.51■□□□□ 0.23
PTPRE-203ENST00000442830 TEX13BQ9BXU2 312 aa16.51■□□□□ 0.23
PTPRE-203ENST00000442830 PUS7LQ9H0K6 701 aaKnown RBP16.51■□□□□ 0.23
PTPRE-203ENST00000442830 RAD21O60216 631 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 AKR1A1P14550 325 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 LRRC41Q15345 812 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-203ENST00000442830 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 ZNF214Q9UL59 606 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-203ENST00000442830 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 ATP11BQ9Y2G3 1177 aa16.5■□□□□ 0.23
PTPRE-203ENST00000442830 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-203ENST00000442830 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 ATP2A1O14983 1001 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 ERC2O15083 957 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 FDX1P10109 184 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
PTPRE-203ENST00000442830 NACAP1Q9BZK3 213 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 PHF24Q9UPV7 400 aa16.49■□□□□ 0.23
PTPRE-203ENST00000442830 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 RASA1P20936 1047 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 TDO2P48775 406 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 ZNF792Q3KQV3 632 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
PTPRE-203ENST00000442830 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
PTPRE-203ENST00000442830 TTC41PQ6P2S7 1318 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 GPAA1O43292 621 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 ZBED4O75132 1171 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
PTPRE-203ENST00000442830 OAZ1P54368 228 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 TACC3Q9Y6A5 838 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
PTPRE-203ENST00000442830 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 MINDY4BA8MYZ0 360 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 F5H6K3 240 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 TTLL1O95922 423 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms