RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GPATCH4Q5T3I0 446 aaKnown RBP24.51■■□□□ 1.51
VPS13B-204ENST00000441350 CST9Q5W186 159 aa24.51■■□□□ 1.51
VPS13B-204ENST00000441350 PHKBQ93100 1093 aa24.51■■□□□ 1.51
VPS13B-204ENST00000441350 FEZ1Q99689 392 aa24.51■■□□□ 1.51
VPS13B-204ENST00000441350 SMARCA1P28370 1054 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 SLC1A4P43007 532 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 BACE1P56817 501 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 SLC35G1Q2M3R5 365 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 DDX11Q96FC9 970 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 ELP3Q9H9T3 547 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 FRMPD2Q68DX3 1309 aaPredicted RBP24.5■■□□□ 1.51
VPS13B-204ENST00000441350 RAD21O60216 631 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 PPFIA3O75145 1194 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 FMNL1O95466 1100 aaPredicted RBP24.5■■□□□ 1.51
VPS13B-204ENST00000441350 MTMR2Q13614 643 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 ERO1BQ86YB8 467 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 CCDC82Q8N4S0 544 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 C2orf69Q8N8R5 385 aa24.5■■□□□ 1.51
VPS13B-204ENST00000441350 CNTNAP5Q8WYK1 1306 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 PASKQ96RG2 1323 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 STK36Q9NRP7 1315 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 SPDYE5A6NIY4 337 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 YY1P25490 414 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 PPATQ06203 517 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 ZYXQ15942 572 aaKnown RBP24.49■■□□□ 1.51
VPS13B-204ENST00000441350 CCDC96Q2M329 555 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 KCTD1Q719H9 257 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 SPICE1Q8N0Z3 855 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 SMC1BQ8NDV3 1235 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 CNKSR2Q8WXI2 1034 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 SPZ1Q9BXG8 430 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 RNF26Q9BY78 433 aaPredicted RBP24.49■■□□□ 1.51
VPS13B-204ENST00000441350 GPCPD1Q9NPB8 672 aa24.49■■□□□ 1.51
VPS13B-204ENST00000441350 ORC3Q9UBD5 711 aaPredicted RBP24.49■■□□□ 1.51
VPS13B-204ENST00000441350 CYTH3O43739 400 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 BMP3P12645 472 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 USP14P54578 494 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 SSRP1Q08945 709 aaKnown RBP24.48■■□□□ 1.51
VPS13B-204ENST00000441350 LPAR1Q92633 364 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 NUP88Q99567 741 aaPredicted RBP24.48■■□□□ 1.51
VPS13B-204ENST00000441350 SLC26A6Q9BXS9 759 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 EMILIN3Q9NT22 766 aa24.48■■□□□ 1.51
VPS13B-204ENST00000441350 TRIM75PA6NK02 468 aa24.47■■□□□ 1.51
VPS13B-204ENST00000441350 C19orf81C9J6K1 198 aa24.47■■□□□ 1.51
VPS13B-204ENST00000441350 PRPF3O43395 683 aaKnown RBP24.47■■□□□ 1.51
VPS13B-204ENST00000441350 TTBK2Q6IQ55 1244 aa24.47■■□□□ 1.51
VPS13B-204ENST00000441350 TRIM22Q8IYM9 498 aa24.47■■□□□ 1.51
VPS13B-204ENST00000441350 BAZ2BQ9UIF8 2168 aaKnown RBP24.47■■□□□ 1.51
VPS13B-204ENST00000441350 RBM46Q8TBY0 533 aaKnown RBP24.46■■□□□ 1.51
VPS13B-204ENST00000441350 C12orf42Q96LP6 360 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 CPVLQ9H3G5 476 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 RIOX1Q9H6W3 641 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 TOMM70O94826 608 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 ZNF784Q8NCA9 323 aaPredicted RBP24.46■■□□□ 1.51
VPS13B-204ENST00000441350 UBA5Q9GZZ9 404 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 KIF3AQ9Y496 699 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 V9GY48 417 aaPredicted RBP24.46■■□□□ 1.51
VPS13B-204ENST00000441350 PTPRFP10586 1907 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 MYH6P13533 1939 aa24.46■■□□□ 1.51
VPS13B-204ENST00000441350 WDR46O15213 610 aaKnown RBP24.45■■□□□ 1.5
VPS13B-204ENST00000441350 PPIL2Q13356 520 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 SH3D19Q5HYK7 790 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 FAM83BQ5T0W9 1011 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 BTNL9Q6UXG8 535 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 FAM184AQ8NB25 1140 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 SLC10A4Q96EP9 437 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 OTUD5Q96G74 571 aa24.45■■□□□ 1.5
VPS13B-204ENST00000441350 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.45■■□□□ 1.5
VPS13B-204ENST00000441350 CIZ1Q9ULV3 898 aaPredicted RBP24.45■■□□□ 1.5
VPS13B-204ENST00000441350 IRF6O14896 467 aa24.44■■□□□ 1.5
VPS13B-204ENST00000441350 DEXIO95424 95 aa24.44■■□□□ 1.5
VPS13B-204ENST00000441350 DGKZQ13574 1117 aa24.44■■□□□ 1.5
VPS13B-204ENST00000441350 OPTNQ96CV9 577 aa24.44■■□□□ 1.5
VPS13B-204ENST00000441350 RBM27Q9P2N5 1060 aaKnown RBP24.44■■□□□ 1.5
VPS13B-204ENST00000441350 TMEM232C9JQI7 657 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 CXCL11O14625 94 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 PLA2G6O60733 806 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 PDCP20941 246 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 SYT1P21579 422 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 SLC16A2P36021 539 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 HMGCS2P54868 508 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 AKAP17AQ02040 695 aaKnown RBP24.43■■□□□ 1.5
VPS13B-204ENST00000441350 PKN1Q16512 942 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 KCNH4Q9UQ05 1017 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 VCAM1P19320 739 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 LARP1BQ659C4 914 aaKnown RBP24.43■■□□□ 1.5
VPS13B-204ENST00000441350 ADGRF4Q8IZF3 695 aa24.43■■□□□ 1.5
VPS13B-204ENST00000441350 ISY1Q9ULR0 285 aaKnown RBP24.43■■□□□ 1.5
VPS13B-204ENST00000441350 hCG_1642624A0A1W2PR95 340 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 GJA5P36382 358 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 WASF1Q92558 559 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 MTMR8Q96EF0 704 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 AIFM3Q96NN9 605 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 JMJD4Q9H9V9 463 aa24.42■■□□□ 1.5
VPS13B-204ENST00000441350 A0A0G2JLL6 359 aaPredicted RBP24.41■■□□□ 1.5
VPS13B-204ENST00000441350 STAT2P52630 851 aa24.41■■□□□ 1.5
VPS13B-204ENST00000441350 PRRT2Q7Z6L0 340 aaPredicted RBP24.41■■□□□ 1.5
VPS13B-204ENST00000441350 ALG1Q9BT22 464 aa24.41■■□□□ 1.5
VPS13B-204ENST00000441350 VAT1LQ9HCJ6 419 aa24.41■■□□□ 1.5
VPS13B-204ENST00000441350 TMOD4Q9NZQ9 345 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms