RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 RLFQ13129 1914 aa24.84■■□□□ 1.57
CPNE1-219ENST00000440240 SEPT4O43236 478 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 RAD21O60216 631 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 GNAT2P19087 354 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 GPR153Q6NV75 609 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 TDHQ8IZJ6 230 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 OSBP2Q969R2 916 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 LRCH3Q96II8 777 aa24.83■■□□□ 1.57
CPNE1-219ENST00000440240 MINDY4BA8MYZ0 360 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 VWA5AO00534 786 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 STAT3P40763 770 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 LRIT3Q3SXY7 679 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 RIOX2Q8IUF8 465 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 MAML3Q96JK9 1138 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.82■■□□□ 1.56
CPNE1-219ENST00000440240 ZNF287Q9HBT7 754 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 FBXO28Q9NVF7 368 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 PPP1R9AQ9ULJ8 1098 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 MYH7P12883 1935 aa24.82■■□□□ 1.56
CPNE1-219ENST00000440240 RASA1P20936 1047 aa24.81■■□□□ 1.56
CPNE1-219ENST00000440240 COPB2P35606 906 aa24.81■■□□□ 1.56
CPNE1-219ENST00000440240 NYAP2Q9P242 653 aa24.81■■□□□ 1.56
CPNE1-219ENST00000440240 ZNF236Q9UL36 1845 aa24.81■■□□□ 1.56
CPNE1-219ENST00000440240 A0A0G2JMZ2 1700 aa24.81■■□□□ 1.56
CPNE1-219ENST00000440240 GPAA1O43292 621 aa24.8■■□□□ 1.56
CPNE1-219ENST00000440240 KCTD2Q14681 263 aa24.8■■□□□ 1.56
CPNE1-219ENST00000440240 FAM83BQ5T0W9 1011 aa24.8■■□□□ 1.56
CPNE1-219ENST00000440240 MMP19Q99542 508 aa24.8■■□□□ 1.56
CPNE1-219ENST00000440240 NRBP1Q9UHY1 535 aa24.8■■□□□ 1.56
CPNE1-219ENST00000440240 DIS3Q9Y2L1 958 aaKnown RBP24.8■■□□□ 1.56
CPNE1-219ENST00000440240 KBTBD13C9JR72 458 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 ERC2O15083 957 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 APPP05067 770 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 TDO2P48775 406 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 ATN1P54259 1190 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-219ENST00000440240 GJC2Q5T442 439 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-219ENST00000440240 TSHZ3Q63HK5 1081 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 ZNF444Q8N0Y2 327 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-219ENST00000440240 TTC41PQ6P2S7 1318 aa24.79■■□□□ 1.56
CPNE1-219ENST00000440240 PATL2C9JE40 543 aaKnown RBP24.78■■□□□ 1.56
CPNE1-219ENST00000440240 F5H6K3 240 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 KLRC3Q07444 240 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 PRAMEF19Q5SWL8 479 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 STK11IPQ8N1F8 1099 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 LBHD1Q9BQE6 289 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-219ENST00000440240 PRKAG2Q9UGJ0 569 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 ZNF214Q9UL59 606 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-219ENST00000440240 DNAH12Q6ZR08 3092 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 ROBO3Q96MS0 1386 aa24.78■■□□□ 1.56
CPNE1-219ENST00000440240 MDM2Q00987 491 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-219ENST00000440240 ANO1Q5XXA6 986 aa24.77■■□□□ 1.56
CPNE1-219ENST00000440240 SLF1Q9BQI6 1058 aa24.77■■□□□ 1.56
CPNE1-219ENST00000440240 NACAP1Q9BZK3 213 aa24.77■■□□□ 1.56
CPNE1-219ENST00000440240 CLIP2Q9UDT6 1046 aa24.77■■□□□ 1.56
CPNE1-219ENST00000440240 PRPF38AQ8NAV1 312 aaKnown RBP24.76■■□□□ 1.55
CPNE1-219ENST00000440240 REPS2Q8NFH8 660 aa24.76■■□□□ 1.55
CPNE1-219ENST00000440240 TINF2Q9BSI4 451 aa24.76■■□□□ 1.55
CPNE1-219ENST00000440240 MYCNP04198 464 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-219ENST00000440240 PGK2P07205 417 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 RTP1P59025 263 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 ZNF792Q3KQV3 632 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 SLC39A5Q6ZMH5 540 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 IFNL3Q8IZI9 196 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 MKL1Q969V6 931 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 TEX13BQ9BXU2 312 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 EPB41L4AQ9HCS5 686 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-219ENST00000440240 SYNPO2Q9UMS6 1093 aa24.75■■□□□ 1.55
CPNE1-219ENST00000440240 M0R2C6 588 aa24.74■■□□□ 1.55
CPNE1-219ENST00000440240 NDUFB10O96000 172 aa24.74■■□□□ 1.55
CPNE1-219ENST00000440240 NUP88Q99567 741 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-219ENST00000440240 PCDHB15Q9Y5E8 787 aa24.74■■□□□ 1.55
CPNE1-219ENST00000440240 FRMPD3Q5JV73 1810 aa24.74■■□□□ 1.55
CPNE1-219ENST00000440240 IGKV6D-41A0A0C4DH26 115 aa24.73■■□□□ 1.55
CPNE1-219ENST00000440240 SLC3A2P08195 630 aaKnown RBP24.73■■□□□ 1.55
CPNE1-219ENST00000440240 RARBP10826 455 aa24.73■■□□□ 1.55
CPNE1-219ENST00000440240 LRRC41Q15345 812 aa24.73■■□□□ 1.55
CPNE1-219ENST00000440240 MTMR4Q9NYA4 1195 aa24.73■■□□□ 1.55
CPNE1-219ENST00000440240 ATP11BQ9Y2G3 1177 aa24.73■■□□□ 1.55
CPNE1-219ENST00000440240 CTDP1Q9Y5B0 961 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-219ENST00000440240 ATP2A1O14983 1001 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 ZBED4O75132 1171 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 PRDM1O75626 825 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 ADCYAP1R1P41586 468 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 PDE4BQ07343 736 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 SNRNP48Q6IEG0 339 aaKnown RBP24.72■■□□□ 1.55
CPNE1-219ENST00000440240 MSL3Q8N5Y2 521 aaKnown RBP24.72■■□□□ 1.55
CPNE1-219ENST00000440240 DEFB123Q8N688 67 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 PI4K2BQ8TCG2 481 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 DDX11Q96FC9 970 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 PARP14Q460N5 1801 aa24.72■■□□□ 1.55
CPNE1-219ENST00000440240 ZNFX1Q9P2E3 1918 aaKnown RBP24.71■■□□□ 1.55
CPNE1-219ENST00000440240 TTLL1O95922 423 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 FAM47AQ5JRC9 791 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 RNF180Q86T96 592 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 CEP95Q96GE4 821 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 FSD1Q9BTV5 496 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 XPNPEP3Q9NQH7 507 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 FEM1BQ9UK73 627 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 CNPY2Q9Y2B0 182 aa24.71■■□□□ 1.55
CPNE1-219ENST00000440240 C1orf53Q5VUE5 145 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms