RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 MRIQ9BWK5 157 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 AGXT2Q9BYV1 514 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 ZNF287Q9HBT7 754 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 CYLDQ9NQC7 956 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PGPEP1Q9NXJ5 209 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TPCN1Q9ULQ1 816 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 DOLKQ9UPQ8 538 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 ATP6V1DQ9Y5K8 247 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TAF6LQ9Y6J9 622 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 WDR33Q9C0J8 1336 aaKnown RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 GPR75-ASB3A0A0A6YYF3 556 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ERICH2A1L162 156 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 MINDY4BA8MYZ0 360 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CAPN5O15484 640 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 PRKAB2O43741 272 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ORC4O43929 436 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZIC2O95409 532 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 FGRP09769 529 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 TIMP2P16035 220 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP5P45974 858 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 MMP14P50281 582 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 RCAN1P53805 252 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 DYNLL1P63167 89 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 GTF2IP78347 998 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 HMGN5P82970 282 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 HDLBPQ00341 1268 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 PDE4BQ07343 736 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 KIAA2012Q0VF49 1180 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 PPP2R5BQ15173 497 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ME3Q16798 604 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CTC1Q2NKJ3 1217 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CCDC93Q567U6 631 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CCDC178Q5BJE1 867 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 DALRD3Q5D0E6 543 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 STRIP1Q5VSL9 837 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 TRAF7Q6Q0C0 670 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 HHIPL2Q6UWX4 724 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 SYNE3Q6ZMZ3 975 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ADGRA1Q86SQ6 560 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF784Q8NCA9 323 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF384Q8TF68 577 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ESR2Q92731 530 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 BRF1Q92994 677 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 GTF3C6Q969F1 213 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ITPKCQ96DU7 683 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 GPR101Q96P66 508 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 AATFQ9NY61 560 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 PIM2Q9P1W9 311 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ARPP21Q9UBL0 812 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 ANGEL1Q9UNK9 670 aaKnown RBP4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CD2APQ9Y5K6 639 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 TIAM2Q8IVF5 1701 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 MROH7-TTC4A0A0A0MT08 1334 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 GAKO14976 1311 aa4.65□□□□□ -1.67
HMGB1P37-201ENST00000439613 CDK5RAP2Q96SN8 1893 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 MYH1P12882 1939 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 LAMB1P07942 1786 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 A0A0G2JLW4 131 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L21D6R901 530 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 IFIT3O14879 490 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 AXIN1O15169 862 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 STX6O43752 255 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 C21orf2O43822 256 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 LZTS3O60299 673 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 CDKL5O76039 1030 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 BRD1O95696 1058 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 STAU1O95793 577 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 DPEP1P16444 411 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 GJB2P29033 226 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 PDIA3P30101 505 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 MCM4P33991 863 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 ADD1P35611 737 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 LIFRP42702 1097 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 BTDP43251 543 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 SMCPP49901 116 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 APOBRQ0VD83 1088 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP4Q13107 963 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 SKOR2Q2VWA4 1001 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 LARP1BQ659C4 914 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 CTR9Q6PD62 1173 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 CPLX2Q6PUV4 134 aaKnown RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 Q6ZNB5 142 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 NFXL1Q6ZNB6 911 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 SGMS1Q86VZ5 419 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 TBC1D10CQ8IV04 446 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 CCDC83Q8IWF9 413 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 TEX11Q8IYF3 940 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 NECAB1Q8N987 351 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 RGS22Q8NE09 1264 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 SDR42E1Q8WUS8 393 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 TEKT1Q969V4 418 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 TCEANC2Q96MN5 208 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 UBAC1Q9BSL1 405 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 PDGFDQ9GZP0 370 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZFAND3Q9H8U3 227 aa4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 EPB41L4AQ9HCS5 686 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P37-201ENST00000439613 DCP1AQ9NPI6 582 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms