RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PLCG2P16885 1265 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 ADRA2BP18089 450 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 TRIM65Q6PJ69 517 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 TXNRD3Q86VQ6 643 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 FNBP4Q8N3X1 1017 aaPredicted RBP11.81□□□□□ -0.52
CD44-210ENST00000434472 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
CD44-210ENST00000434472 CCDC12Q8WUD4 166 aaPredicted RBP11.81□□□□□ -0.52
CD44-210ENST00000434472 C8orf37Q96NL8 207 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 MED15Q96RN5 788 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 DNAI1Q9UI46 699 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
CD44-210ENST00000434472 MCM7P33993 719 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 TRIM14Q14142 442 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 ZNF658Q5TYW1 1059 aaPredicted RBP11.8□□□□□ -0.52
CD44-210ENST00000434472 RRAGBQ5VZM2 374 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 ARID3AQ99856 593 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
CD44-210ENST00000434472 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
CD44-210ENST00000434472 LIMA1Q9UHB6 759 aaKnown RBP11.8□□□□□ -0.52
CD44-210ENST00000434472 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
CD44-210ENST00000434472 WNT7AO00755 349 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 CASQ1P31415 396 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 PBX1P40424 430 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 PRPHP41219 470 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 CBX1P83916 185 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 PAK1Q13153 545 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 HSP90AA4PQ58FG1 418 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 DTHD1Q6ZMT9 781 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 APTXQ7Z2E3 356 aaKnown RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 MNS1Q8NEH6 495 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 MAGEF1Q9HAY2 307 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 IL17RBQ9NRM6 502 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
CD44-210ENST00000434472 DDX41Q9UJV9 622 aaKnown RBP11.79□□□□□ -0.52
CD44-210ENST00000434472 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 CCDC175P0C221 793 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 STAT6P42226 847 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 STX17P56962 302 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 EVX2Q03828 476 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 GOLGA8FQ08AF8 430 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 GOLGA8DPQ0D2H9 430 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 NFIXQ14938 502 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 ELF2Q15723 593 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 KRT25Q7Z3Z0 450 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CUEDC2Q9H467 287 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 LY75O60449 1722 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 M0R2N6 131 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 URI1O94763 535 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 RASA1P20936 1047 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 ST5P78524 1137 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 STIM1Q13586 685 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 KCNB1Q14721 858 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 IL17AQ16552 155 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 C16orf86Q6ZW13 317 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 CCDC47Q96A33 483 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 FAM163AQ96GL9 167 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 AK8Q96MA6 479 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 RTFDC1Q9BY42 306 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 CCSER1Q9C0I3 900 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 ARGLU1Q9NWB6 273 aaPredicted RBP11.78□□□□□ -0.52
CD44-210ENST00000434472 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
CD44-210ENST00000434472 H7C1D1 291 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms