RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 HPSEQ9Y251 543 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 PLEKHG2Q9H7P9 1386 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 PCDH11XQ9BZA7 1347 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 MYO1CO00159 1063 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 SMAPO00193 183 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 DTNBO60941 627 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 IVLP07476 585 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 SLC3A2P08195 630 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 DNAJA1P31689 397 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 ACTN2P35609 894 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 ME1P48163 572 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 PSEN2P49810 448 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 NDUFA8P51970 172 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 TGFB2P61812 414 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 AKAP4Q5JQC9 854 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 SRLQ86TD4 932 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 TLR7Q9NYK1 1049 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
VTI1A-202ENST00000432306 MAP3K2Q9Y2U5 619 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 PRKAB1Q9Y478 270 aa9.16□□□□□ -0.94
VTI1A-202ENST00000432306 WDR19Q8NEZ3 1342 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 RGS20O76081 388 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 ZNF202O95125 648 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 SMC2O95347 1197 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 FDPSP14324 419 aaKnown RBP9.15□□□□□ -0.94
VTI1A-202ENST00000432306 PDIA3P30101 505 aaKnown RBP9.15□□□□□ -0.94
VTI1A-202ENST00000432306 NOP2P46087 812 aaKnown RBP9.15□□□□□ -0.94
VTI1A-202ENST00000432306 MYL5Q02045 173 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 MAP9Q49MG5 647 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 CARD6Q9BX69 1037 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 FTOQ9C0B1 505 aaKnown RBP eCLIP9.15□□□□□ -0.94
VTI1A-202ENST00000432306 BICC1Q9H694 974 aaKnown RBP9.15□□□□□ -0.94
VTI1A-202ENST00000432306 ADAM21Q9UKJ8 722 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 BCS1LQ9Y276 419 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
VTI1A-202ENST00000432306 SPTLC2O15270 562 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PPP6R2O75170 966 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 DDX58O95786 925 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 CASQ1P31415 396 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 SOX11P35716 441 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 TXLNAP40222 546 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 RFX5P48382 616 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 ARHGAP27Q6ZUM4 889 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PRPF38AQ8NAV1 312 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 NEK11Q8NG66 645 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 GPR108Q9NPR9 543 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 C10orf71Q711Q0 1435 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 SBF1O95248 1867 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PPP1R12AO14974 1030 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 URI1O94763 535 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 EIF2S2P20042 333 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 UBASH3AP57075 661 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 ST5P78524 1137 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 SLC39A14Q15043 492 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 ZRSR1Q15695 479 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 TUSC1Q2TAM9 212 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 AMOTQ4VCS5 1084 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 TNNI3KQ59H18 835 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 ODR4Q5SWX8 454 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 GET4Q7L5D6 327 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PACS2Q86VP3 889 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PDILTQ8N807 584 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 C1orf131Q8NDD1 294 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 PARD6BQ9BYG5 372 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
VTI1A-202ENST00000432306 FPGT-TNNI3KV9GXZ4 949 aa9.14□□□□□ -0.95
VTI1A-202ENST00000432306 SPEF2Q9C093 1822 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 FGAP02671 866 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 DNAJB2P25686 324 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 ZRSR2Q15696 482 aaKnown RBP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 ENOX2Q16206 610 aaKnown RBP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 LONRF2Q1L5Z9 754 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 BEND6Q5SZJ8 279 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 NT5DC1Q5TFE4 455 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms