RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
CSNK1E-208ENST00000431611 LBHD1Q9BQE6 289 aaPredicted RBP18.15■□□□□ 0.5
CSNK1E-208ENST00000431611 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 RTP1P59025 263 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 FAM83BQ5T0W9 1011 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 RIOX2Q8IUF8 465 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 DEFB123Q8N688 67 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 MMP19Q99542 508 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 MKNK2Q9HBH9 465 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 PRKAG2Q9UGJ0 569 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 PPP1R9AQ9ULJ8 1098 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 A0A0G2JMZ2 1700 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 ZNF236Q9UL36 1845 aa18.14■□□□□ 0.49
CSNK1E-208ENST00000431611 GSG1L2A8MUP6 293 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 VWA5AO00534 786 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 STAT3P40763 770 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 KCTD2Q14681 263 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 GIMAP6Q6P9H5 292 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 SLC17A8Q8NDX2 589 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 APPBP2Q92624 585 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 ATP11BQ9Y2G3 1177 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 LAMA3Q16787 3333 aa18.13■□□□□ 0.49
CSNK1E-208ENST00000431611 RLFQ13129 1914 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 RASA1P20936 1047 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 COPB2P35606 906 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 SLC39A5Q6ZMH5 540 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 Q7L0L9 218 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 OSBP2Q969R2 916 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 NRBP1Q9UHY1 535 aa18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 ZNF214Q9UL59 606 aaPredicted RBP18.12■□□□□ 0.49
CSNK1E-208ENST00000431611 RNF113AO15541 343 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 PGK2P07205 417 aa18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 ZFYP08048 801 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 TSHZ3Q63HK5 1081 aa18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 REPS2Q8NFH8 660 aa18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 NYAP2Q9P242 653 aa18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 DIS3Q9Y2L1 958 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-208ENST00000431611 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 F5H6K3 240 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 GPAA1O43292 621 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 GNAT2P19087 354 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 ADCYAP1R1P41586 468 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 KLRC3Q07444 240 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 LRRC41Q15345 812 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 ZNF792Q3KQV3 632 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 FAM47AQ5JRC9 791 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 NUP88Q99567 741 aaPredicted RBP18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 SLF1Q9BQI6 1058 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
CSNK1E-208ENST00000431611 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 APPP05067 770 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 RARBP10826 455 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 TDO2P48775 406 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 FERMT2Q96AC1 680 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 TEX13BQ9BXU2 312 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 ZNF287Q9HBT7 754 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 MTMR10Q9NXD2 777 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
CSNK1E-208ENST00000431611 NDUFB10O96000 172 aa18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 SNX17Q15036 470 aa18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 LRRFIP1Q32MZ4 808 aaKnown RBP18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 TRIM60Q495X7 471 aa18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 ZNF444Q8N0Y2 327 aaPredicted RBP18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 PRDM5Q9NQX1 630 aaPredicted RBP18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 STXBP5LQ9Y2K9 1186 aa18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 MYH8P13535 1937 aa18.08■□□□□ 0.48
CSNK1E-208ENST00000431611 PATL2C9JE40 543 aaKnown RBP18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 M0R2C6 588 aa18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 PRDM1O75626 825 aa18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 TAL1P17542 331 aaPredicted RBP18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 SNRNP48Q6IEG0 339 aaKnown RBP18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 RNF180Q86T96 592 aa18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
CSNK1E-208ENST00000431611 IGKV6D-41A0A0C4DH26 115 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 ZBED4O75132 1171 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 PGK1P00558 417 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 ZNF865P0CJ78 1059 aaPredicted RBP18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 C1orf53Q5VUE5 145 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 IFNL3Q8IZI9 196 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 CPXCR1Q8N123 301 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 PHF24Q9UPV7 400 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 CNPY2Q9Y2B0 182 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 RIPK3Q9Y572 518 aa18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 CTDP1Q9Y5B0 961 aaPredicted RBP18.06■□□□□ 0.48
CSNK1E-208ENST00000431611 TTC41PQ6P2S7 1318 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 ERC2O15083 957 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 AKR1A1P14550 325 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 MSL3Q8N5Y2 521 aaKnown RBP18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 MKL1Q969V6 931 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms