RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 IFNL3Q8IZI9 196 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 REPS2Q8NFH8 660 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 DDRGK1Q96HY6 314 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
CPSF4-203ENST00000430038 ZMYND8Q9ULU4 1186 aaPredicted RBP20.48■□□□□ 0.87
CPSF4-203ENST00000430038 PATL2C9JE40 543 aaKnown RBP20.47■□□□□ 0.87
CPSF4-203ENST00000430038 PRAMEF19Q5SWL8 479 aa20.47■□□□□ 0.87
CPSF4-203ENST00000430038 AMOTL1Q8IY63 956 aa20.47■□□□□ 0.87
CPSF4-203ENST00000430038 SHCBP1Q8NEM2 672 aa20.47■□□□□ 0.87
CPSF4-203ENST00000430038 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
CPSF4-203ENST00000430038 IVNS1ABPQ9Y6Y0 642 aa20.47■□□□□ 0.87
CPSF4-203ENST00000430038 ZFYP08048 801 aaPredicted RBP20.46■□□□□ 0.87
CPSF4-203ENST00000430038 CYBAP13498 195 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 SYN1P17600 705 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 LRRC26Q2I0M4 334 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 ZMYM1Q5SVZ6 1142 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 MFSD14CQ5VZR4 134 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 MB21D1Q8N884 522 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
CPSF4-203ENST00000430038 VWA5AO00534 786 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 SOX1O00570 391 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-203ENST00000430038 STRNO43815 780 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 MX1P20591 662 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 GDF15Q99988 308 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 SH2D4AQ9H788 454 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 MKNK2Q9HBH9 465 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 DDX20Q9UHI6 824 aaKnown RBP20.45■□□□□ 0.86
CPSF4-203ENST00000430038 ZNF214Q9UL59 606 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-203ENST00000430038 PPP1R9AQ9ULJ8 1098 aa20.45■□□□□ 0.86
CPSF4-203ENST00000430038 F5H6K3 240 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 RAD21O60216 631 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 APPP05067 770 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 CNGA1P29973 690 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 TDO2P48775 406 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 KLRC3Q07444 240 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 OLFML2BQ68BL8 750 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 MROH8Q9H579 483 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 CLIP2Q9UDT6 1046 aa20.44■□□□□ 0.86
CPSF4-203ENST00000430038 NDUFB10O96000 172 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 PGK2P07205 417 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 MAML3Q96JK9 1138 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 FSD1Q9BTV5 496 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 GOPCQ9HD26 462 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 RIPK3Q9Y572 518 aa20.43■□□□□ 0.86
CPSF4-203ENST00000430038 ERC2O15083 957 aa20.42■□□□□ 0.86
CPSF4-203ENST00000430038 GNAT2P19087 354 aa20.42■□□□□ 0.86
CPSF4-203ENST00000430038 FAM47AQ5JRC9 791 aa20.42■□□□□ 0.86
CPSF4-203ENST00000430038 VPS53Q5VIR6 699 aa20.42■□□□□ 0.86
CPSF4-203ENST00000430038 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
CPSF4-203ENST00000430038 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
CPSF4-203ENST00000430038 STAT3P40763 770 aa20.41■□□□□ 0.86
CPSF4-203ENST00000430038 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
CPSF4-203ENST00000430038 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
CPSF4-203ENST00000430038 MKL1Q969V6 931 aa20.41■□□□□ 0.86
CPSF4-203ENST00000430038 MTMR4Q9NYA4 1195 aa20.41■□□□□ 0.86
CPSF4-203ENST00000430038 MCM3APO60318 1980 aa20.41■□□□□ 0.86
CPSF4-203ENST00000430038 FCER1AP12319 257 aa20.4■□□□□ 0.86
CPSF4-203ENST00000430038 TAL1P17542 331 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-203ENST00000430038 PDE1AP54750 535 aa20.4■□□□□ 0.86
CPSF4-203ENST00000430038 PPARAQ07869 468 aa20.4■□□□□ 0.86
CPSF4-203ENST00000430038 GJC2Q5T442 439 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-203ENST00000430038 ZNF444Q8N0Y2 327 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-203ENST00000430038 LRCH3Q96II8 777 aa20.4■□□□□ 0.86
CPSF4-203ENST00000430038 SENP6Q9GZR1 1112 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-203ENST00000430038 SLC25A27O95847 323 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 MAGEA10P43363 369 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-203ENST00000430038 CTDSPL2Q05D32 466 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 ZNF792Q3KQV3 632 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
CPSF4-203ENST00000430038 NEDD1Q8NHV4 660 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 CHMP4CQ96CF2 233 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 MMP19Q99542 508 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 SLF1Q9BQI6 1058 aa20.39■□□□□ 0.85
CPSF4-203ENST00000430038 BMP8BP34820 402 aa20.38■□□□□ 0.85
CPSF4-203ENST00000430038 TFAP4Q01664 338 aa20.38■□□□□ 0.85
CPSF4-203ENST00000430038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.38■□□□□ 0.85
CPSF4-203ENST00000430038 SEPT4O43236 478 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 NMT2O60551 498 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 IGHDP01880 384 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-203ENST00000430038 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 FAM227BQ96M60 508 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 NAPBQ9H115 298 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
CPSF4-203ENST00000430038 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
CPSF4-203ENST00000430038 PRPF38AQ8NAV1 312 aaKnown RBP20.36■□□□□ 0.85
CPSF4-203ENST00000430038 RAVER2Q9HCJ3 691 aaKnown RBP20.36■□□□□ 0.85
CPSF4-203ENST00000430038 LAMA2P24043 3122 aaKnown RBP20.36■□□□□ 0.85
CPSF4-203ENST00000430038 A0A0D9SFI3 127 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 DNM1LO00429 736 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 MSCO60682 206 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 TTLL1O95922 423 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 LRRFIP1Q32MZ4 808 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms