RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RECKO95980 971 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 VAMP1P23763 118 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 RACK1P63244 317 aaKnown RBP8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 TRIM26Q12899 539 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 TMEM192Q8IY95 271 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 DIRC2Q96SL1 478 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 SP110Q9HB58 689 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 DDX41Q9UJV9 622 aaKnown RBP8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 FZD5Q13467 585 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 TCTN2Q96GX1 697 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 SLC6A18Q96N87 628 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 SLC9A7Q96T83 725 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 NSUN3Q9H649 340 aaKnown RBP8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZNRF3Q9ULT6 936 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 CUX2O14529 1486 aa8.25□□□□□ -1.09
HMGB3P5-201ENST00000428894 SSU72P8A0A1W2PR75 194 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 FITM1A5D6W6 292 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 BTBD11A6QL63 1104 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 IMPDH2P12268 514 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 RPL10P27635 214 aaKnown RBP8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 RNF111Q6ZNA4 994 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 SPPL2CQ8IUH8 684 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 LILRA2Q8N149 483 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZNF655Q8N720 491 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 FERD3LQ96RJ6 166 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 FOXP3Q9BZS1 431 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 RNF32Q9H0A6 362 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 EBF1Q9UH73 591 aa8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZCCHC6Q5VYS8 1495 aaKnown RBP8.24□□□□□ -1.09
HMGB3P5-201ENST00000428894 FAM86C2PA6NEL3 165 aa8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 PCBP3P57721 371 aaKnown RBP8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 DUSP4Q13115 394 aa8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 SYDE1Q6ZW31 735 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 FBXL21Q9UKT6 434 aa8.23□□□□□ -1.09
HMGB3P5-201ENST00000428894 SIGLEC6O43699 453 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 PRAMEF1O95521 474 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 JAG1P78504 1218 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 CHRNEQ04844 493 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 NR0B2Q15466 257 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 TIGD5Q53EQ6 642 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 WAPLQ7Z5K2 1190 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZNF654Q8IZM8 581 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 ANKS4BQ8N8V4 417 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZMYM5Q9UJ78 669 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 TCFL5Q9UL49 500 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 MINPP1Q9UNW1 487 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 ZNF281Q9Y2X9 895 aa8.22□□□□□ -1.09
HMGB3P5-201ENST00000428894 DBX1A6NMT0 343 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 SYPP08247 313 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 ACRP10323 421 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 FBXO15Q8NCQ5 510 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 LINC00116Q8NCU8 138 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 BHLHE22Q8NFJ8 381 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 LINC01599Q8WXQ3 324 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 DHRS1Q96LJ7 313 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 KRTAP9-9Q9BYP9 154 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 KRTAP9-4Q9BYQ2 154 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 EPB41L4BQ9H329 900 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 KCNK12Q9HB15 430 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 DCP1AQ9NPI6 582 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 CHST7Q9NS84 486 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 PPT2Q9UMR5 302 aa8.21□□□□□ -1.1
HMGB3P5-201ENST00000428894 AUHQ13825 339 aaKnown RBP8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 PPP1R16BQ96T49 567 aa8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 G6PC3Q9BUM1 346 aa8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 SUCOQ9UBS9 1254 aaKnown RBP8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 PCDHB12Q9Y5F1 795 aa8.2□□□□□ -1.1
HMGB3P5-201ENST00000428894 MEIS1O00470 390 aa8.19□□□□□ -1.1
HMGB3P5-201ENST00000428894 FKTNO75072 461 aa8.19□□□□□ -1.1
HMGB3P5-201ENST00000428894 PAK2Q13177 524 aa8.19□□□□□ -1.1
HMGB3P5-201ENST00000428894 TM9SF2Q99805 663 aa8.19□□□□□ -1.1
HMGB3P5-201ENST00000428894 GPR160Q9UJ42 338 aa8.19□□□□□ -1.1
HMGB3P5-201ENST00000428894 C9IYK1 514 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 PSPNO60542 156 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 RAP1GAPP47736 663 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 BBS9Q3SYG4 887 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 ZPBP2Q6X784 338 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 CCDC144CPQ8IYA2 1237 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 TAB3Q8N5C8 712 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
HMGB3P5-201ENST00000428894 TMEM82A0PJX8 343 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 PMS1P54277 932 aaKnown RBP8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 HDLBPQ00341 1268 aaKnown RBP8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 SNX17Q15036 470 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 SLC14A2Q15849 920 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms