RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 APOA5Q6Q788 366 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 USP50Q70EL3 339 aaPredicted RBP18.01■□□□□ 0.47
TVP23C-203ENST00000428082 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 TAF1DQ9H5J8 278 aaPredicted RBP18.01■□□□□ 0.47
TVP23C-203ENST00000428082 KIAA1468Q9P260 1216 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
TVP23C-203ENST00000428082 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 PPP6R2O75170 966 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 SLC39A14Q15043 492 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 NFXL1Q6ZNB6 911 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 APOBEC3FQ8IUX4 373 aaKnown RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 TEPSINQ96N21 525 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 SHMT1P34896 483 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 NDUFA8P51970 172 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 METTL16Q86W50 562 aaKnown RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 FOXP4Q8IVH2 680 aaPredicted RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 C17orf53Q8N3J3 647 aaPredicted RBP18■□□□□ 0.47
TVP23C-203ENST00000428082 ZNF287Q9HBT7 754 aa18■□□□□ 0.47
TVP23C-203ENST00000428082 A0A1B0GVL5 298 aa17.99■□□□□ 0.47
TVP23C-203ENST00000428082 SART3Q15020 963 aaKnown RBP17.99■□□□□ 0.47
TVP23C-203ENST00000428082 TMEM67Q5HYA8 995 aa17.99■□□□□ 0.47
TVP23C-203ENST00000428082 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
TVP23C-203ENST00000428082 DHX40Q8IX18 779 aaKnown RBP17.99■□□□□ 0.47
TVP23C-203ENST00000428082 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
TVP23C-203ENST00000428082 IGDCC4Q8TDY8 1250 aa17.99■□□□□ 0.47
TVP23C-203ENST00000428082 SWAP70Q9UH65 585 aa17.99■□□□□ 0.47
TVP23C-203ENST00000428082 NID2Q14112 1375 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 TSPY2A6NKD2 308 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 SMTNL1A8MU46 457 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 PPFIA3O75145 1194 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 GSDMDP57764 484 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 TFAP4Q01664 338 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 EAPPQ56P03 285 aaPredicted RBP17.98■□□□□ 0.47
TVP23C-203ENST00000428082 TMTC2Q8N394 836 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 RCAN1P53805 252 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 RBM10P98175 930 aaKnown RBP17.98■□□□□ 0.47
TVP23C-203ENST00000428082 KRT40Q6A162 431 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 IMPACTQ9P2X3 320 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
TVP23C-203ENST00000428082 NMT2O60551 498 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 ZNF202O95125 648 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 NLRP12P59046 1061 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
TVP23C-203ENST00000428082 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 MIGA2Q7L4E1 593 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
TVP23C-203ENST00000428082 RRAGCQ9HB90 399 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 SENP2Q9HC62 589 aa17.97■□□□□ 0.47
TVP23C-203ENST00000428082 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 KIF28PB7ZC32 967 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 TATDN1Q6P1N9 297 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 LRRC8AQ8IWT6 810 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 PAXBP1Q9Y5B6 917 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 ERICH2A1L162 156 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 AKR1B1P15121 316 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.471e-5■□□□□ 9.3
TVP23C-203ENST00000428082 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 AXDND1Q5T1B0 1012 aaPredicted RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 DLK2Q6UY11 383 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 PNMA8AQ86V59 439 aaPredicted RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 IQCA1Q86XH1 822 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 AOPEPQ8N6M6 819 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 ZC3H15Q8WU90 426 aaKnown RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 ZSCAN10Q96SZ4 725 aaPredicted RBP17.96■□□□□ 0.47
TVP23C-203ENST00000428082 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 IL17RBQ9NRM6 502 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
TVP23C-203ENST00000428082 TNKSO95271 1327 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 FAM237AA0A1B0GTK4 181 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 PFKFB1P16118 471 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 MICU3Q86XE3 530 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
TVP23C-203ENST00000428082 ZNF526Q8TF50 670 aaPredicted RBP17.95■□□□□ 0.46
TVP23C-203ENST00000428082 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.95■□□□□ 0.46
TVP23C-203ENST00000428082 ADM5C9JUS6 153 aa17.94■□□□□ 0.46
TVP23C-203ENST00000428082 TBC1D12O60347 775 aa17.94■□□□□ 0.46
TVP23C-203ENST00000428082 CUTAO60888 179 aa17.94■□□□□ 0.46
TVP23C-203ENST00000428082 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
TVP23C-203ENST00000428082 VEGFAP15692 232 aaPredicted RBP17.94■□□□□ 0.46
TVP23C-203ENST00000428082 IFNAR1P17181 557 aa17.94■□□□□ 0.46
TVP23C-203ENST00000428082 SYKP43405 635 aa17.94■□□□□ 0.46
TVP23C-203ENST00000428082 NT5C2P49902 561 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms