RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 FMNL1O95466 1100 aaPredicted RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 SLC5A1P13866 664 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 PDE6AP16499 860 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 CCT6AP40227 531 aaKnown RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 GRAPQ13588 217 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 JAKMIP3Q5VZ66 844 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 HOOK1Q9UJC3 728 aaKnown RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 WNT7AO00755 349 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 PRKAB2O43741 272 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 KIF5CO60282 957 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 DPYDQ12882 1025 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 BRD3Q15059 726 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 PPFIBP1Q86W92 1011 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
MSH5-206ENST00000423982 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 ANKRD65E5RJM6 399 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
MSH5-206ENST00000423982 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 PANX2Q96RD6 677 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 GYPCP04921 128 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 STRBPQ96SI9 672 aaKnown RBP16.24■□□□□ 0.19
MSH5-206ENST00000423982 BRIP1Q9BX63 1249 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 PLEKHA4Q9H4M7 779 aa16.24■□□□□ 0.19
MSH5-206ENST00000423982 ADD3Q9UEY8 706 aaKnown RBP16.24■□□□□ 0.19
MSH5-206ENST00000423982 MFAP3LO75121 409 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 FGFR2P21802 821 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 SAFBQ15424 915 aaKnown RBP eCLIP16.23■□□□□ 0.19
MSH5-206ENST00000423982 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
MSH5-206ENST00000423982 NCAPH2Q6IBW4 605 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 GOLGA5Q8TBA6 731 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
MSH5-206ENST00000423982 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 RSPH14Q9UHP6 348 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 L1RE1Q9UN81 338 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 LRP5O75197 1615 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 ACTN2P35609 894 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 ERVK-24P63145 666 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 TXNRD3Q86VQ6 643 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 TRIM10Q9UDY6 481 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 TFR2Q9UP52 801 aa16.23■□□□□ 0.19
MSH5-206ENST00000423982 IFNAR1P17181 557 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 PBX1P40424 430 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 MBD4O95243 580 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 CUL4BQ13620 913 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 HDXQ7Z353 690 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 IFNL3Q8IZI9 196 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 SPATA20Q8TB22 786 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 RAB21Q9UL25 225 aa16.22■□□□□ 0.19
MSH5-206ENST00000423982 RRP15Q9Y3B9 282 aaKnown RBP16.22■□□□□ 0.19
MSH5-206ENST00000423982 SRPRBQ9Y5M8 271 aaKnown RBP16.22■□□□□ 0.19
MSH5-206ENST00000423982 CTAGE9A4FU28 777 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 PRDM1O75626 825 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 SRGNP10124 158 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 RTN1Q16799 776 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 SRLQ86TD4 932 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 NAPBQ9H115 298 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 RASSF4Q9H2L5 321 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 LRRIQ3A6PVS8 624 aaPredicted RBP16.21■□□□□ 0.19
MSH5-206ENST00000423982 RASGRF1Q13972 1273 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 CASP8Q14790 479 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 CEP112Q8N8E3 955 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 VPS16Q9H269 839 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
MSH5-206ENST00000423982 ERCC5P28715 1186 aaPredicted RBP16.2■□□□□ 0.18
MSH5-206ENST00000423982 GPSM2P81274 684 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 SKIDA1Q1XH10 827 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 MAGEB6Q8N7X4 407 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 PAGE5Q96GU1 130 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 GDAP1L1Q96MZ0 367 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 CTNND2Q9UQB3 1225 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 STK36Q9NRP7 1315 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 LIFRP42702 1097 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 USP5P45974 858 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 UBE3CQ15386 1083 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms