RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 EPB41L4AQ9HCS5 686 aaPredicted RBP18.68■□□□□ 0.58
PKP4-204ENST00000421462 AGPAT5Q9NUQ2 364 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 MYO1AQ9UBC5 1043 aa18.68■□□□□ 0.58
PKP4-204ENST00000421462 NFAT5O94916 1531 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 OVOS2A0A0G2JMS6 1433 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 ZPR1O75312 459 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 GSDMAQ96QA5 445 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 V9GY48 417 aaPredicted RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 C4BP0C0L5 1744 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 CIAO1O76071 339 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 TRIM21P19474 475 aaKnown RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 MCM7P33993 719 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 PTGDRQ13258 359 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 KRT26Q7Z3Y9 468 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 DHX37Q8IY37 1157 aaKnown RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
PKP4-204ENST00000421462 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 LRRC1Q9BTT6 524 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 HAUS4Q9H6D7 363 aa18.67■□□□□ 0.58
PKP4-204ENST00000421462 MCM3P25205 808 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 KCTD19Q17RG1 926 aaPredicted RBP18.66■□□□□ 0.58
PKP4-204ENST00000421462 CCDC91Q7Z6B0 441 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
PKP4-204ENST00000421462 FANCBQ8NB91 859 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
PKP4-204ENST00000421462 JPH2Q9BR39 696 aaPredicted RBP18.66■□□□□ 0.58
PKP4-204ENST00000421462 XDHP47989 1333 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 WDR19Q8NEZ3 1342 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 RNF187Q5TA31 235 aaPredicted RBP18.66■□□□□ 0.58
PKP4-204ENST00000421462 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
PKP4-204ENST00000421462 KRT86O43790 486 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 MAP2K2P36507 400 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 CCDC70Q6NSX1 233 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
PKP4-204ENST00000421462 PRCPP42785 496 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 AKNAD1Q5T1N1 836 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 EP400NLQ6ZTU2 488 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
PKP4-204ENST00000421462 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.581e-7■■□□□ 14.3
PKP4-204ENST00000421462 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
PKP4-204ENST00000421462 B4DLN1 442 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 CKAP4Q07065 602 aaKnown RBP18.65■□□□□ 0.58
PKP4-204ENST00000421462 PPFIA1Q13136 1202 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 KCNV1Q6PIU1 500 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 SHISA4Q96DD7 197 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 DCAF5Q96JK2 942 aa18.65■□□□□ 0.58
PKP4-204ENST00000421462 PSMD14O00487 310 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 LIFRP42702 1097 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 ELOA2Q8IYF1 753 aaPredicted RBP18.64■□□□□ 0.57
PKP4-204ENST00000421462 GREM2Q9H772 168 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
PKP4-204ENST00000421462 KIAA0754O94854 1291 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 KRT14P02533 472 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 TRIM47Q96LD4 638 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
PKP4-204ENST00000421462 ITGA6P23229 1130 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 KRT2P35908 639 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 PMS1P54277 932 aaKnown RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 WDR59Q6PJI9 974 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 OTUD6BQ8N6M0 293 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 ITIH6Q6UXX5 1313 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 MYH10P35580 1976 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 ATP2B2Q01814 1243 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 CXorf56Q9H5V9 222 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 EIF3HO15372 352 aaKnown RBP eCLIP18.63■□□□□ 0.57
PKP4-204ENST00000421462 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 NAP1L1P55209 391 aaKnown RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 RNASE9P60153 205 aaKnown RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 CCDC181Q5TID7 509 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 PIK3AP1Q6ZUJ8 805 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 MTRQ99707 1265 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 MLXIPQ9HAP2 919 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 ZNHIT6Q9NWK9 470 aaKnown RBP18.63■□□□□ 0.57
PKP4-204ENST00000421462 LRWD1Q9UFC0 647 aa18.63■□□□□ 0.57
PKP4-204ENST00000421462 ESYT3A0FGR9 886 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 PLEKHA8P1O95397 391 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 TTC38Q5R3I4 469 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 KRT28Q7Z3Y7 464 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 SUGP1Q8IWZ8 645 aaKnown RBP18.62■□□□□ 0.57
PKP4-204ENST00000421462 MB21D1Q8N884 522 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 IFT81Q8WYA0 676 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 FAM184BQ9ULE4 1060 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 STK36Q9NRP7 1315 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
PKP4-204ENST00000421462 XBP1P17861 261 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 APBA1Q02410 837 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 SPAG1Q07617 926 aa18.62■□□□□ 0.57
PKP4-204ENST00000421462 NHEJ1Q9H9Q4 299 aaPredicted RBP18.62■□□□□ 0.57
PKP4-204ENST00000421462 NCK2O43639 380 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 CPP00450 1065 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms