RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 FLT1P17948 1338 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 CYTH3O43739 400 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 NOVP48745 357 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 CCAR2Q8N163 923 aaKnown RBP21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 C4orf32Q8N8J7 132 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 DAGLBQ8NCG7 672 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 CCDC34Q96HJ3 373 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 SAP30BPQ9UHR5 308 aaKnown RBP21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 QSER1Q2KHR3 1735 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 TRIM37O94972 964 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 ERCC5P28715 1186 aaPredicted RBP21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 CDK8P49336 464 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 E2F4Q16254 413 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 IL17AQ16552 155 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 MFSD14BQ5SR56 506 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 TYW1BQ6NUM6 668 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 VSTM4Q8IW00 320 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 SLF2Q8IX21 1173 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 SP8Q8IXZ3 490 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 TEX11Q8IYF3 940 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 PROM2Q8N271 834 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 NEDD1Q8NHV4 660 aa21.59■■□□□ 1.05
CROCCP3-202ENST00000420820 SERPINC1P01008 464 aa21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 RXRBP28702 533 aa21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 DPYDQ12882 1025 aa21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 HSP90AA2PQ14568 343 aaPredicted RBP21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 ARL6IP4Q66PJ3 421 aaKnown RBP21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 LZTS2Q9BRK4 669 aa21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 INTS13Q9NVM9 706 aa21.58■■□□□ 1.04
CROCCP3-202ENST00000420820 VWA3AA6NCI4 1184 aa21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 CTIFO43310 598 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 SFPQP23246 707 aaKnown RBP eCLIP21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 GALNT17Q6IS24 598 aa21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 GPKOWQ92917 476 aaPredicted RBP eCLIP21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 PAXBP1Q9Y5B6 917 aa21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 RBM10P98175 930 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 GSDMAQ96QA5 445 aa21.57■■□□□ 1.04
CROCCP3-202ENST00000420820 E4F1Q66K89 784 aaPredicted RBP21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 EYA3Q99504 573 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 SPZ1Q9BXG8 430 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 PDCL3Q9H2J4 239 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 TMX1Q9H3N1 280 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 BARHL2Q9NY43 387 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 NFE2L3Q9Y4A8 694 aa21.56■■□□□ 1.04
CROCCP3-202ENST00000420820 STXBP3O00186 592 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 CFAP100Q494V2 611 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 PYM1Q9BRP8 204 aaKnown RBP21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 PSDA5PKW4 1024 aaPredicted RBP21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 MCM7P33993 719 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 CUL4BQ13620 913 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 TXNRD1Q16881 649 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 PDXDC2PQ6P474 469 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 CCDC148Q8NFR7 591 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 MAP7D2Q96T17 732 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 PCDHA6Q9UN73 950 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 SUGT1Q9Y2Z0 365 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 PCDHA8Q9Y5H6 950 aa21.55■■□□□ 1.04
CROCCP3-202ENST00000420820 TMEM232C9JQI7 657 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 PPEF1O14829 653 aaPredicted RBP21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 SMARCA1P28370 1054 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 AFMP43652 599 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 TBX2Q13207 712 aaPredicted RBP21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 CEP135Q66GS9 1140 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 STX8Q9UNK0 236 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 DAGLAQ9Y4D2 1042 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 PLIN4Q96Q06 1357 aa21.54■■□□□ 1.04
CROCCP3-202ENST00000420820 C6orf229H3BNL8 230 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 LONP1P36776 959 aaKnown RBP21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 ZNF710Q8N1W2 664 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 IQUBQ8NA54 791 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 COA1Q9GZY4 146 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 CD44P16070 742 aaKnown RBP21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 MTERF4Q7Z6M4 381 aaKnown RBP21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 TSC1Q92574 1164 aa21.53■■□□□ 1.04
CROCCP3-202ENST00000420820 KLRF2D3W0D1 207 aa21.52■■□□□ 1.04
CROCCP3-202ENST00000420820 TRMT44Q8IYL2 757 aaKnown RBP21.52■■□□□ 1.04
CROCCP3-202ENST00000420820 CCDC112Q8NEF3 446 aa21.52■■□□□ 1.04
CROCCP3-202ENST00000420820 PPP1R3GB7ZBB8 358 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 CASP1P29466 404 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 GABPAQ06546 454 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 RASGRP4Q8TDF6 673 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 MTRQ99707 1265 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 ZMYND12Q9H0C1 365 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 SRGNP10124 158 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 GTF2IP78347 998 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 SPATA1Q5VX52 437 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 APTXQ7Z2E3 356 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 CEP95Q96GE4 821 aa21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 SAMSN1Q9NSI8 373 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 TRMT1Q9NXH9 659 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-202ENST00000420820 CCDC194A0A1B0GVG4 234 aa21.5■■□□□ 1.03
CROCCP3-202ENST00000420820 KIF2AO00139 706 aaPredicted RBP21.5■■□□□ 1.03
CROCCP3-202ENST00000420820 NRDCO43847 1150 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms