RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 DDX20Q9UHI6 824 aaKnown RBP16.91■□□□□ 0.3
LINC01006-202ENST00000418309 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
LINC01006-202ENST00000418309 FCER1AP12319 257 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 GNAT2P19087 354 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
LINC01006-202ENST00000418309 FBXO28Q9NVF7 368 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
LINC01006-202ENST00000418309 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
LINC01006-202ENST00000418309 A0A1W2PPC1 479 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 M0R2C6 588 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 COBLO75128 1261 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 SLC25A27O95847 323 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 COL6A1P12109 1028 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 RASA1P20936 1047 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 OLFML2BQ68BL8 750 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
LINC01006-202ENST00000418309 TRPV1Q8NER1 839 aa16.89■□□□□ 0.29
LINC01006-202ENST00000418309 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC01006-202ENST00000418309 A0A0G2JMZ2 1700 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
LINC01006-202ENST00000418309 CYBAP13498 195 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 ABRAQ8N0Z2 381 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 MMP19Q99542 508 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 GDF15Q99988 308 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
LINC01006-202ENST00000418309 ZNFX1Q9P2E3 1918 aaKnown RBP16.88■□□□□ 0.29
LINC01006-202ENST00000418309 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
LINC01006-202ENST00000418309 FRMPD3Q5JV73 1810 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 VWA5AO00534 786 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 PRDM1O75626 825 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 STAT3P40763 770 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 PRAMEF19Q5SWL8 479 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 OTUD7AQ8TE49 926 aaPredicted RBP16.87■□□□□ 0.29
LINC01006-202ENST00000418309 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
LINC01006-202ENST00000418309 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
LINC01006-202ENST00000418309 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
LINC01006-202ENST00000418309 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
LINC01006-202ENST00000418309 PARP14Q460N5 1801 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 F5H6K3 240 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 BMP8BP34820 402 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 MAGEA10P43363 369 aaPredicted RBP16.86■□□□□ 0.29
LINC01006-202ENST00000418309 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
LINC01006-202ENST00000418309 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
LINC01006-202ENST00000418309 KLRC3Q07444 240 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 KCTD2Q14681 263 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 GJC2Q5T442 439 aaPredicted RBP16.86■□□□□ 0.29
LINC01006-202ENST00000418309 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 ARRDC4Q8NCT1 418 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 MAML3Q96JK9 1138 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
LINC01006-202ENST00000418309 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
LINC01006-202ENST00000418309 DNM1LO00429 736 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 SEPT4O43236 478 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 IGHA2P01877 340 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 PGK2P07205 417 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 MX1P20591 662 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
LINC01006-202ENST00000418309 NAPBQ9H115 298 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
LINC01006-202ENST00000418309 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
LINC01006-202ENST00000418309 NDUFB10O96000 172 aa16.84■□□□□ 0.29
LINC01006-202ENST00000418309 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
LINC01006-202ENST00000418309 COPB2P35606 906 aa16.84■□□□□ 0.29
LINC01006-202ENST00000418309 PDE4BQ07343 736 aa16.84■□□□□ 0.29
LINC01006-202ENST00000418309 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
LINC01006-202ENST00000418309 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
LINC01006-202ENST00000418309 SOX1O00570 391 aaPredicted RBP16.83■□□□□ 0.28
LINC01006-202ENST00000418309 TSPY3P0CV98 308 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 TSPY8P0CW00 308 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 MDM2Q00987 491 aaPredicted RBP16.83■□□□□ 0.28
LINC01006-202ENST00000418309 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 LRCH3Q96II8 777 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.28
LINC01006-202ENST00000418309 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
LINC01006-202ENST00000418309 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
LINC01006-202ENST00000418309 MYH4Q9Y623 1939 aa16.83■□□□□ 0.28
LINC01006-202ENST00000418309 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 ZBED4O75132 1171 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 TTLL1O95922 423 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 SNRNP48Q6IEG0 339 aaKnown RBP16.82■□□□□ 0.28
LINC01006-202ENST00000418309 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 REPS2Q8NFH8 660 aa16.82■□□□□ 0.28
LINC01006-202ENST00000418309 MKL1Q969V6 931 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms