RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 COPB2P35606 906 aa18.7■□□□□ 0.58
SBDSP1-201ENST00000415772 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
SBDSP1-201ENST00000415772 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
SBDSP1-201ENST00000415772 RNF180Q86T96 592 aa18.7■□□□□ 0.58
SBDSP1-201ENST00000415772 XPNPEP3Q9NQH7 507 aa18.7■□□□□ 0.58
SBDSP1-201ENST00000415772 CYP2D7A0A087X1C5 515 aa18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 LRRC41Q15345 812 aa18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 KIAA1755Q5JYT7 1200 aa18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 FAM109BQ6ICB4 259 aaPredicted RBP18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
SBDSP1-201ENST00000415772 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 UBE3CQ15386 1083 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 BADQ92934 168 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 HAUS7Q99871 368 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 NRBP1Q9UHY1 535 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
SBDSP1-201ENST00000415772 PGK2P07205 417 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 STAT3P40763 770 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 SLC4A3P48751 1232 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 RIOX2Q8IUF8 465 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 TINF2Q9BSI4 451 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
SBDSP1-201ENST00000415772 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 SHHQ15465 462 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 STK11IPQ8N1F8 1099 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 DDX11Q96FC9 970 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 ZBTB40Q9NUA8 1239 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 FBXO28Q9NVF7 368 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
SBDSP1-201ENST00000415772 VWA5AO00534 786 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 AKR1A1P14550 325 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 CTR9Q6PD62 1173 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 PDLIM7Q9NR12 457 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 PPP1R9AQ9ULJ8 1098 aa18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
SBDSP1-201ENST00000415772 BAZ2AQ9UIF9 1905 aaKnown RBP18.64■□□□□ 0.58
SBDSP1-201ENST00000415772 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 PGK1P00558 417 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 IGHA2P01877 340 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 RAG1P15918 1043 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 TLE2Q04725 743 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 ISY1Q9ULR0 285 aaKnown RBP18.64■□□□□ 0.57
SBDSP1-201ENST00000415772 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 ZBED4O75132 1171 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 CLTBP09497 229 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 SNX17Q15036 470 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 C9orf50Q5SZB4 431 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 SIRT2Q8IXJ6 389 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 NUP133Q8WUM0 1156 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 GUCD1Q96NT3 240 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 TEX13BQ9BXU2 312 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
SBDSP1-201ENST00000415772 RLFQ13129 1914 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 LAMA3Q16787 3333 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 PQBP1O60828 265 aaKnown RBP18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 APPP05067 770 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 TDO2P48775 406 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 ZNF792Q3KQV3 632 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 FAM184BQ9ULE4 1060 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 ADAMTS5Q9UNA0 930 aa18.62■□□□□ 0.57
SBDSP1-201ENST00000415772 COL11A1P12107 1806 aaPredicted RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 A0A1W2PQ45 241 aaPredicted RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 A0A1W2PQY0 241 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 SMIM22K7EJ46 135 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 SMAD3P84022 425 aaKnown RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 LRRFIP1Q32MZ4 808 aaKnown RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 ZNF444Q8N0Y2 327 aaPredicted RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 CPXCR1Q8N123 301 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 PRPF38AQ8NAV1 312 aaKnown RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 VTI1AQ96AJ9 217 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 SPC25Q9HBM1 224 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 STARD7Q9NQZ5 370 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 ECHDC1Q9NTX5 307 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 ZNF214Q9UL59 606 aaPredicted RBP18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 MYH7P12883 1935 aa18.61■□□□□ 0.57
SBDSP1-201ENST00000415772 TRIM43BA6NCK2 446 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 CHGBP05060 677 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 TAL1P17542 331 aaPredicted RBP18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 FPGSQ05932 587 aa18.6■□□□□ 0.57
SBDSP1-201ENST00000415772 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms