RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TYW5A2RUC4 315 aaKnown RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 SERPINB6P35237 376 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 PIK3CAP42336 1068 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 LGSNQ5TDP6 509 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 ANKRD20A3Q5VUR7 823 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 C7orf31Q8N865 590 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 NDUFAB1O14561 156 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 POLA2Q14181 598 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 NAA35Q5VZE5 725 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 IFNLR1Q8IU57 520 aaPredicted RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 ADPGKQ9BRR6 497 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 RAB20Q9NX57 234 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 TECP42680 631 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 CABP7Q86V35 215 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 ADCY8P40145 1251 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 EEF2KMTQ96G04 330 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 TSPYL2Q9H2G4 693 aaPredicted RBP20.33■□□□□ 0.85
SHANK3-202ENST00000414786 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
SHANK3-202ENST00000414786 H7C0C1 242 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 FLOT1O75955 427 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 ATP5OP48047 213 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 PSMD2Q13200 908 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 MTHFSDQ2M296 383 aaKnown RBP20.33■□□□□ 0.85
SHANK3-202ENST00000414786 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 LMNTD2Q8IXW0 634 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 SEPT9Q9UHD8 586 aaPredicted RBP20.33■□□□□ 0.85
SHANK3-202ENST00000414786 SLC9C1Q4G0N8 1177 aa20.33■□□□□ 0.85
SHANK3-202ENST00000414786 TTC38Q5R3I4 469 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 FAM182BQ5T319 152 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 A1BGP04217 495 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 CCDC93Q567U6 631 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 CNGA4Q8IV77 575 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 STMN1P16949 149 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 HDXQ7Z353 690 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 FAM71BQ8TC56 605 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 KRT82Q9NSB4 513 aa20.33■□□□□ 0.84
SHANK3-202ENST00000414786 DKC1O60832 514 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■■■■ 44.8
SHANK3-202ENST00000414786 PPP2R5EQ16537 467 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 NELFBQ8WX92 580 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 XAGE2Q96GT9 111 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 MARK3P27448 753 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 DPH5Q9H2P9 285 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 BAG6P46379 1132 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 PAK1Q13153 545 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 DENND2CQ68D51 928 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 ZBTB8OSQ8IWT0 167 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 OCM2P0CE71 109 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 OCMP0CE72 109 aaPredicted RBP20.32■□□□□ 0.84
SHANK3-202ENST00000414786 TTC19Q6DKK2 380 aaPredicted RBP20.32■□□□□ 0.84
SHANK3-202ENST00000414786 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 SECISBP2LQ93073 1101 aaKnown RBP20.32■□□□□ 0.84
SHANK3-202ENST00000414786 NAPGQ99747 312 aaPredicted RBP20.32■□□□□ 0.84
SHANK3-202ENST00000414786 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 TNNQ9UQP3 1299 aa20.32■□□□□ 0.84
SHANK3-202ENST00000414786 LRRC9Q6ZRR7 1453 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 ELP1O95163 1332 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 FRMD3A2A2Y4 597 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 MMTAG2Q9BU76 263 aaKnown RBP20.31■□□□□ 0.84
SHANK3-202ENST00000414786 YIPF2Q9BWQ6 316 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 TLR3O15455 904 aaKnown RBP20.31■□□□□ 0.84
SHANK3-202ENST00000414786 DYNLT1P63172 113 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
SHANK3-202ENST00000414786 DBN1Q16643 649 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 TMEM259Q4ZIN3 620 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 KCTD17Q8N5Z5 321 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 SUCLA2Q9P2R7 463 aaPredicted RBP20.31■□□□□ 0.84
SHANK3-202ENST00000414786 VWA3BQ502W6 1294 aa20.31■□□□□ 0.84
SHANK3-202ENST00000414786 RCN2Q14257 317 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 GPBP1Q86WP2 473 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 FAM149B1Q96BN6 582 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 TFAP4Q01664 338 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 CYP26C1Q6V0L0 522 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 ZNF277Q9NRM2 450 aaPredicted RBP20.3■□□□□ 0.84
SHANK3-202ENST00000414786 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 ZNF18P17022 549 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 TPX2Q9ULW0 747 aaKnown RBP20.3■□□□□ 0.84
SHANK3-202ENST00000414786 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
SHANK3-202ENST00000414786 HFM1A2PYH4 1435 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 GSTA4O15217 222 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 PUM3Q15397 648 aaKnown RBP20.3■□□□□ 0.84
SHANK3-202ENST00000414786 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 RFX6Q8HWS3 928 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 LRGUKQ96M69 825 aa20.3■□□□□ 0.84
SHANK3-202ENST00000414786 HESX1Q9UBX0 185 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 CPSF3Q9UKF6 684 aaKnown RBP20.29■□□□□ 0.84
SHANK3-202ENST00000414786 CD109Q6YHK3 1445 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 SOX5P35711 763 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 SFMBT2Q5VUG0 894 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 AP5M1Q9H0R1 490 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 BAIAP2L1Q9UHR4 511 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 PLCH2O75038 1416 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 A6NJR5 290 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 HEXIM1O94992 359 aaKnown RBP20.29■□□□□ 0.84
SHANK3-202ENST00000414786 STX2P32856 288 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 AS3MTQ9HBK9 375 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 POC1B-GALNT4F8VUJ3 575 aa20.29■□□□□ 0.84
SHANK3-202ENST00000414786 PPM1KQ8N3J5 372 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms