RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
DDB1-202ENST00000414411 PPATQ06203 517 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 ANKRD1Q15327 319 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 ERO1BQ86YB8 467 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 ELP3Q9H9T3 547 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 TMX2Q9Y320 296 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
DDB1-202ENST00000414411 F13A1P00488 732 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 GJB2P29033 226 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 ECE1P42892 770 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 FGD1P98174 961 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 CCDC173Q0VFZ6 552 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 TROAPQ12815 778 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
DDB1-202ENST00000414411 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
DDB1-202ENST00000414411 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 SYCE3A1L190 88 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 TMEM88BA6NKF7 163 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 HUNKP57058 714 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 SPP2Q13103 211 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 APOA5Q6Q788 366 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
DDB1-202ENST00000414411 PPP1R9BQ96SB3 815 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 TLL2Q9Y6L7 1015 aa11.56□□□□□ -0.56
DDB1-202ENST00000414411 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 IRF6O14896 467 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 PDIA3P30101 505 aaKnown RBP11.55□□□□□ -0.56
DDB1-202ENST00000414411 GJA5P36382 358 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 RCAN1P53805 252 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 BACE1P56817 501 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 ATP2B2Q01814 1243 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 GMCL1P1Q8NEA9 526 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
DDB1-202ENST00000414411 RBSNQ9H1K0 784 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 ATP6V1DQ9Y5K8 247 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 PTPRFP10586 1907 aa11.55□□□□□ -0.56
DDB1-202ENST00000414411 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 CCDC69A6NI79 296 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 F5H6K3 240 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 GADD45BO75293 160 aaPredicted RBP11.54□□□□□ -0.56
DDB1-202ENST00000414411 SNHG28P0DPA3 235 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 KLRC3Q07444 240 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 PPIL2Q13356 520 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 NFXL1Q6ZNB6 911 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
DDB1-202ENST00000414411 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
DDB1-202ENST00000414411 OPTNQ96CV9 577 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 HHIPL1Q96JK4 782 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 MTMR6Q9Y217 621 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 CNPY2Q9Y2B0 182 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 CXCL11O14625 94 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 APLP1P51693 650 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 CATIPQ7Z7H3 387 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 TRIM44Q96DX7 344 aaPredicted RBP11.54□□□□□ -0.56
DDB1-202ENST00000414411 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 MAP3K14Q99558 947 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
DDB1-202ENST00000414411 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 PFKFB2O60825 505 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 DDAH1O94760 285 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 PDHBP11177 359 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 MTMR2Q13614 643 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 RGMBQ6NW40 437 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 WNK4Q96J92 1243 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 MYL10Q9BUA6 226 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
DDB1-202ENST00000414411 NID2Q14112 1375 aa11.53□□□□□ -0.56
DDB1-202ENST00000414411 ZBTB43O43298 467 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 NDUFB10O96000 172 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 CALM1P0DP23 149 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 CALM2P0DP24 149 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 CALM3P0DP25 149 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.56
DDB1-202ENST00000414411 CLCN1P35523 988 aa11.52□□□□□ -0.56
DDB1-202ENST00000414411 USP14P54578 494 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms