RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TOP1P11387 765 aaKnown RBP19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 ATP2B2Q01814 1243 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 NFXL1Q6ZNB6 911 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 SGMS1Q86VZ5 419 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 BRF1Q92994 677 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 MKL1Q969V6 931 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 KAT14Q9H8E8 782 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 LY9Q9HBG7 655 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 EMILIN3Q9NT22 766 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 OSBPP22059 807 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 HOXA7P31268 230 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 MCM2P49736 904 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 USP14P54578 494 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 KIF22Q14807 665 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 RCSD1Q6JBY9 416 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 SYNE3Q6ZMZ3 975 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 ACER1Q8TDN7 264 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 FEZ1Q99689 392 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 EFCC1Q9HA90 598 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 TRIM17Q9Y577 477 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 PTPRFP10586 1907 aa19.32■□□□□ 0.68
TSPAN4-208ENST00000409531 BCRP11274 1271 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 AK2P54819 239 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 LACTBP83111 547 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 TOB2Q14106 344 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 OTOP1Q7RTM1 612 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 C12orf42Q96LP6 360 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 TMEM47Q9BQJ4 181 aa19.31■□□□□ 0.68
TSPAN4-208ENST00000409531 FBXO46Q6PJ61 603 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 CATIPQ7Z7H3 387 aa19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 ASCC2Q9H1I8 757 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 TMX2Q9Y320 296 aa19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 SLC12A7Q9Y666 1083 aa19.3■□□□□ 0.68
TSPAN4-208ENST00000409531 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 CALM1P0DP23 149 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 CALM2P0DP24 149 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 CALM3P0DP25 149 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 EVCP57679 992 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 CAP1Q01518 475 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 SIAH1Q8IUQ4 282 aa19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 GPHNQ9NQX3 736 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-208ENST00000409531 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 DDAH1O94760 285 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 GNRH1P01148 92 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 GCLCP48506 637 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 RCAN1P53805 252 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 IRX3P78415 501 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 APOBRQ0VD83 1088 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 ZNF654Q8IZM8 581 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 GMCL1P1Q8NEA9 526 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 ZNF274Q96GC6 653 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 TNRC18O15417 2968 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 APOA5Q6Q788 366 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 LRRC47Q8N1G4 583 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 P2RX7Q99572 595 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 ARHGAP39Q9C0H5 1083 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 SENP2Q9HC62 589 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 NAP1L2Q9ULW6 460 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 PTPN22Q9Y2R2 807 aa19.27■□□□□ 0.68
TSPAN4-208ENST00000409531 ZBTB43O43298 467 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 PSMC4P43686 418 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 ANKRD13CQ8N6S4 541 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 LPAR1Q92633 364 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 SNX21Q969T3 373 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 LOC285556D6RIA3 1793 aa19.26■□□□□ 0.67
TSPAN4-208ENST00000409531 GOLGA8BA8MQT2 603 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 F5H6K3 240 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 RAD21O60216 631 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 VCAM1P19320 739 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 HOXD10P28358 340 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 KLRC3Q07444 240 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 PPP2R5BQ15173 497 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 FAM110CQ1W6H9 321 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 CATSPERGQ6ZRH7 1159 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 NOL8Q76FK4 1167 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 CHMP4CQ96CF2 233 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms