RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 OR52Z1P0C646 297 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 ABCD1P33897 745 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 IREB2P48200 963 aaKnown RBP18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 STX17P56962 302 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 PRKG1Q13976 671 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 FBXO18Q8NFZ0 1043 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 PCDHA12Q9UN75 941 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 FLOT1O75955 427 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 POSTNQ15063 836 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 KCNJ14Q9UNX9 436 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 LONP1P36776 959 aaKnown RBP18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 BIRC3Q13489 604 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 ARFGAP3Q9NP61 516 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 V9GYY5 206 aaPredicted RBP18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 SP8Q8IXZ3 490 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 ANKRD35Q8N283 1001 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 PCDHA1Q9Y5I3 950 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 HLTFQ14527 1009 aaKnown RBP eCLIP18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 APOA5Q6Q788 366 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 TEKT3Q9BXF9 490 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 DBNDD1Q9H9R9 158 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 PKD2L1Q9P0L9 805 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 JAK2O60674 1132 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 YWHAEP62258 255 aaKnown RBP18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 TRPC3Q13507 836 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 CEP112Q8N8E3 955 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 FAM212AQ96EL1 285 aa18.71■□□□□ 0.59
PCDHA13-202ENST00000409494 AKR1B15C9JRZ8 316 aaPredicted RBP18.71■□□□□ 0.58
PCDHA13-202ENST00000409494 RCAN1P53805 252 aa18.71■□□□□ 0.58
PCDHA13-202ENST00000409494 PLIN2Q99541 437 aa18.71■□□□□ 0.58
PCDHA13-202ENST00000409494 MINPP1Q9UNW1 487 aa18.71■□□□□ 0.58
PCDHA13-202ENST00000409494 USP17L8P0C7I0 530 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 RASGRF1Q13972 1273 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 MYRIPQ8NFW9 859 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 AK8Q96MA6 479 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CBX8Q9HC52 389 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 LRRC7Q96NW7 1537 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CYP21A2P08686 494 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CMA1P23946 247 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 TUBB2AQ13885 445 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 KCTD2Q14681 263 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 TUBB2BQ9BVA1 445 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 MLXIPQ9HAP2 919 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CCPG1Q9ULG6 757 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 WDR19Q8NEZ3 1342 aa18.7■□□□□ 0.58
PCDHA13-202ENST00000409494 CTAGE15A4D2H0 777 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ATP2A1O14983 1001 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 CTAGE8P0CG41 777 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ADD1P35611 737 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 CDC37L1Q7L3B6 337 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 CTAGE6Q86UF2 777 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 CTAGE4Q8IX94 777 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 NRBP2Q9NSY0 501 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 TLR7Q9NYK1 1049 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 LARSQ9P2J5 1176 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 SYNRGQ9UMZ2 1314 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ASNSP08243 561 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 BMP3P12645 472 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 GADL1Q6ZQY3 521 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 IFNAR1P17181 557 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ZNF75DP51815 510 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 MYCT1Q8N699 235 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 IMPACTQ9P2X3 320 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 DCAF17Q5H9S7 520 aaPredicted RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 TMEM179Q6ZVK1 233 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ZBTB8OSQ8IWT0 167 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 LRRC47Q8N1G4 583 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 TRIM6Q9C030 488 aaPredicted RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
PCDHA13-202ENST00000409494 ZNF500O60304 480 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 FMNL1O95466 1100 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 SPECC1Q5M775 1068 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 FAM160B1Q5W0V3 765 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 GLG1Q92896 1179 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 CTAGE9A4FU28 777 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 HOMER2Q9NSB8 354 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 MECOMQ03112 1051 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 CCDC77Q9BR77 488 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 SYT10Q6XYQ8 523 aa18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHA13-202ENST00000409494 A0A1W2PQ27 194 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 A0A1W2PQ64 194 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 A0A1W2PQD8 194 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 TAF12Q16514 161 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 DYDC1Q8WWB3 177 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 CD209Q9NNX6 404 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 ALX1Q15699 326 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms