RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SLC26A6Q9BXS9 759 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 KIAA1683Q9H0B3 1180 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 ELP3Q9H9T3 547 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.79■■□□□ 1.4
CHKB-201ENST00000406938 PHIPQ8WWQ0 1821 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 USP17L10C9JJH3 530 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 UBE2Q2LH0YL09 131 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 FDPSP14324 419 aaKnown RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 SPP2Q13103 211 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 GPATCH4Q5T3I0 446 aaKnown RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 KCTD1Q719H9 257 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 NUP88Q99567 741 aaPredicted RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 GBA2Q9HCG7 927 aaPredicted RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 ORC3Q9UBD5 711 aaPredicted RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 ISY1Q9ULR0 285 aaKnown RBP23.78■■□□□ 1.4
CHKB-201ENST00000406938 STK36Q9NRP7 1315 aa23.78■■□□□ 1.4
CHKB-201ENST00000406938 TRIM75PA6NK02 468 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 FMNL1O95466 1100 aaPredicted RBP23.77■■□□□ 1.4
CHKB-201ENST00000406938 FKBP1BP68106 108 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 SSRP1Q08945 709 aaKnown RBP23.77■■□□□ 1.4
CHKB-201ENST00000406938 LDLRAD1Q5T700 205 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 GPCPD1Q9NPB8 672 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 SLC35G1Q2M3R5 365 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 FAM184AQ8NB25 1140 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 CNKSR2Q8WXI2 1034 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 CPVLQ9H3G5 476 aa23.77■■□□□ 1.4
CHKB-201ENST00000406938 BACE1P56817 501 aa23.76■■□□□ 1.39
CHKB-201ENST00000406938 RNF26Q9BY78 433 aaPredicted RBP23.76■■□□□ 1.39
CHKB-201ENST00000406938 AFG3L2Q9Y4W6 797 aa23.76■■□□□ 1.39
CHKB-201ENST00000406938 SPDYE5A6NIY4 337 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 CYTH3O43739 400 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 BMP3P12645 472 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 USP14P54578 494 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 DGKZQ13574 1117 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 TTBK2Q6IQ55 1244 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 C2orf69Q8N8R5 385 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 SPZ1Q9BXG8 430 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 UBA5Q9GZZ9 404 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 KIF3AQ9Y496 699 aa23.75■■□□□ 1.39
CHKB-201ENST00000406938 YY1P25490 414 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 FAM83BQ5T0W9 1011 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 CST9Q5W186 159 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 ERO1BQ86YB8 467 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 LPAR1Q92633 364 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 OTUD5Q96G74 571 aa23.74■■□□□ 1.39
CHKB-201ENST00000406938 hCG_1642624A0A1W2PR95 340 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 UNCXA6NJT0 531 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 PRPF3O43395 683 aaKnown RBP23.73■■□□□ 1.39
CHKB-201ENST00000406938 PPATQ06203 517 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 SMC1BQ8NDV3 1235 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 EMILIN3Q9NT22 766 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 CIZ1Q9ULV3 898 aaPredicted RBP23.73■■□□□ 1.39
CHKB-201ENST00000406938 V9GY48 417 aaPredicted RBP23.73■■□□□ 1.39
CHKB-201ENST00000406938 PASKQ96RG2 1323 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 DEXIO95424 95 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 SLC16A2P36021 539 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 HMGCS2P54868 508 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 AKAP17AQ02040 695 aaKnown RBP23.73■■□□□ 1.39
CHKB-201ENST00000406938 PKP1Q13835 747 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 PIBF1Q8WXW3 757 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 AIFM3Q96NN9 605 aa23.73■■□□□ 1.39
CHKB-201ENST00000406938 TMEM232C9JQI7 657 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 VCAM1P19320 739 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 PDCP20941 246 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 SYT1P21579 422 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 SMARCA1P28370 1054 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 LARP1BQ659C4 914 aaKnown RBP23.72■■□□□ 1.39
CHKB-201ENST00000406938 OPTNQ96CV9 577 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 RIOX1Q9H6W3 641 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 TRPM7Q96QT4 1865 aa23.72■■□□□ 1.39
CHKB-201ENST00000406938 C19orf81C9J6K1 198 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 IRF6O14896 467 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 WDR46O15213 610 aaKnown RBP23.71■■□□□ 1.39
CHKB-201ENST00000406938 FOSBP53539 338 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 PKN1Q16512 942 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 RBM46Q8TBY0 533 aaKnown RBP23.71■■□□□ 1.39
CHKB-201ENST00000406938 WASF1Q92558 559 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 C12orf42Q96LP6 360 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 ALG1Q9BT22 464 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 CHMP5Q9NZZ3 219 aa23.71■■□□□ 1.39
CHKB-201ENST00000406938 IKQ13123 557 aaPredicted RBP23.7■■□□□ 1.39
CHKB-201ENST00000406938 PPIL2Q13356 520 aa23.7■■□□□ 1.39
CHKB-201ENST00000406938 ADGRF4Q8IZF3 695 aa23.7■■□□□ 1.39
CHKB-201ENST00000406938 ZNF784Q8NCA9 323 aaPredicted RBP23.7■■□□□ 1.39
CHKB-201ENST00000406938 RBM27Q9P2N5 1060 aaKnown RBP23.7■■□□□ 1.39
CHKB-201ENST00000406938 STX6O43752 255 aa23.7■■□□□ 1.38
CHKB-201ENST00000406938 STAT2P52630 851 aa23.7■■□□□ 1.38
CHKB-201ENST00000406938 SLC10A4Q96EP9 437 aa23.7■■□□□ 1.38
CHKB-201ENST00000406938 VAT1LQ9HCJ6 419 aa23.7■■□□□ 1.38
CHKB-201ENST00000406938 TOMM70O94826 608 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 SH3D19Q5HYK7 790 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 HOMER1Q86YM7 354 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 RRP36Q96EU6 259 aaKnown RBP23.69■■□□□ 1.38
CHKB-201ENST00000406938 PIGSQ96S52 555 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 JMJD4Q9H9V9 463 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 TMOD4Q9NZQ9 345 aa23.69■■□□□ 1.38
CHKB-201ENST00000406938 SCG2P13521 617 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms