RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MYH8P13535 1937 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 A0A1W2PRG0 241 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 GSG1L2A8MUP6 293 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 GPAA1O43292 621 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 CDK8P49336 464 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 PDE1AP54750 535 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 FCGRTP55899 365 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 PRSS12P56730 875 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 IRX3P78415 501 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 PABPC4Q13310 644 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 USP17L2Q6R6M4 530 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 CCDC129Q6ZRS4 1044 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 ARMC5Q96C12 935 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZNF333Q96JL9 665 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 TXNRD2Q9NNW7 524 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 GINM1Q9NU53 330 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 GABRQQ9UN88 632 aa6.92□□□□□ -1.3
HMGB1P20-201ENST00000402555 MINDY4BA8MYZ0 360 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 TNPO2O14787 897 aaKnown RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 APPP05067 770 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZFYP08048 801 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 ELNP15502 786 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 VCAM1P19320 739 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 EN2P19622 333 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 HOXD10P28358 340 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 GCLCP48506 637 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 FLT3LGP49771 235 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 HERVK_113P62684 666 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 MTFR1Q15390 333 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 FAM110CQ1W6H9 321 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 KIAA1755Q5JYT7 1200 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 AMOTL1Q8IY63 956 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 RAET1EQ8TD07 263 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 PAGR1Q9BTK6 254 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 KIAA1683Q9H0B3 1180 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 STAP2Q9UGK3 403 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 SWAP70Q9UH65 585 aa6.91□□□□□ -1.3
HMGB1P20-201ENST00000402555 BRCA2P51587 3418 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 PRDM1O75626 825 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 GNRH1P01148 92 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 GRK4P32298 578 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 TDO2P48775 406 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 USP14P54578 494 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 PRMT2P55345 433 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 ICA1Q05084 483 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 AAMPQ13685 434 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 Q3C1V9 767 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 TMEM179Q6ZVK1 233 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 NBPF11Q86T75 865 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 CHD1LQ86WJ1 897 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 SIAH1Q8IUQ4 282 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 SPICE1Q8N0Z3 855 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 LRCH3Q96II8 777 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 C12orf42Q96LP6 360 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 PORCNQ9H237 461 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 RPAP3Q9H6T3 665 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 RBM27Q9P2N5 1060 aaKnown RBP6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 MORF4L1Q9UBU8 362 aa6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 BIN2Q9UBW5 565 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 TSR3Q9UJK0 312 aaKnown RBP6.9□□□□□ -1.3
HMGB1P20-201ENST00000402555 MKI67P46013 3256 aaKnown RBP6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 A0A0D9SFI3 127 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 C3orf80F5H4A9 247 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 FOXP2O15409 715 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 RAD21O60216 631 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 ADCY3O60266 1144 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 CNMDO75829 334 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 EEF2P13639 858 aaKnown RBP6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 RASA1P20936 1047 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 ERVK-9P63128 1117 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 ERVK-24P63145 666 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 NUCB1Q02818 461 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 LRRFIP1Q32MZ4 808 aaKnown RBP6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 SBK1Q52WX2 424 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 GIMAP6Q6P9H5 292 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 CATSPERGQ6ZRH7 1159 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms