RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 MYL10Q9BUA6 226 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 WDR18Q9BV38 432 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
BRCC3-206ENST00000399042 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 POLR2AP24928 1970 aaKnown RBP10.42□□□□□ -0.74
BRCC3-206ENST00000399042 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 F5H6K3 240 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 CXCL11O14625 94 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 DDAH1O94760 285 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 CETPP11597 493 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
BRCC3-206ENST00000399042 KLRC3Q07444 240 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 SEC23AQ15436 765 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 RTN1Q16799 776 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 FASTKD5Q7L8L6 764 aaKnown RBP10.41□□□□□ -0.74
BRCC3-206ENST00000399042 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 LPAR1Q92633 364 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 MKL1Q969V6 931 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 ZSCAN31Q96LW9 406 aaPredicted RBP10.41□□□□□ -0.74
BRCC3-206ENST00000399042 KIF2CQ99661 725 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 VCPKMTQ9H867 229 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 TMX2Q9Y320 296 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 AFG3L2Q9Y4W6 797 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 FOCADQ5VW36 1801 aa10.41□□□□□ -0.74
BRCC3-206ENST00000399042 CDK5RAP2Q96SN8 1893 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 CCL15-CCL14A0A0B4J2E2 113 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 NDUFB10O96000 172 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 ZBTB48P10074 688 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 BMP3P12645 472 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 RXRAP19793 462 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 GNAQP50148 359 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 COL9A3Q14050 684 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 TOB2Q14106 344 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 CCL15Q16663 113 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 SPRYD7Q5W111 196 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 OTUD7BQ6GQQ9 843 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 RCSD1Q6JBY9 416 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 IL17RAQ96F46 866 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 KIAA1683Q9H0B3 1180 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 ALDH8A1Q9H2A2 487 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-206ENST00000399042 SENP2Q9HC62 589 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 SYNPO2Q9UMS6 1093 aa10.4□□□□□ -0.74
BRCC3-206ENST00000399042 LAMB1P07942 1786 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 DDX60LQ5H9U9 1706 aaKnown RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 MANSC4A6NHS7 340 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 FLOT1O75955 427 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 GOLGA8HP0CJ92 632 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 OSBPP22059 807 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 IRX3P78415 501 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 FAM83BQ5T0W9 1011 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 KCTD1Q719H9 257 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 RASAL3Q86YV0 1011 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 SIAH1Q8IUQ4 282 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 CCDC82Q8N4S0 544 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 GMCL1P1Q8NEA9 526 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 CHURC1Q8WUH1 139 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 PIBF1Q8WXW3 757 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 ZNF274Q96GC6 653 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 CAPNS2Q96L46 248 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 VAT1LQ9HCJ6 419 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 SH2B1Q9NRF2 756 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 RBM28Q9NW13 759 aaKnown RBP10.39□□□□□ -0.75
BRCC3-206ENST00000399042 TPCN1Q9ULQ1 816 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 PAPPA2Q9BXP8 1791 aa10.39□□□□□ -0.75
BRCC3-206ENST00000399042 A0A0G2JLL6 359 aaPredicted RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 WDR46O15213 610 aaKnown RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 CDKL5O76039 1030 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 SLC10A3P09131 477 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 PDHBP11177 359 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 PDIA3P30101 505 aaKnown RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 SREBF2Q12772 1141 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms