RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 USP17L4A6NCW7 530 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 DIXDC1Q155Q3 683 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 USP17L1Q7RTZ2 530 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TC2NQ8N9U0 490 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CALML4Q96GE6 196 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 GDAP1L1Q96MZ0 367 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 RNF26Q9BY78 433 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 MRPL44Q9H9J2 332 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 SEC63Q9UGP8 760 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 FRMPD2Q68DX3 1309 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 A0A0U1RQJ8 604 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC70Q6NSX1 233 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TEX11Q8IYF3 940 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 STAG2Q8N3U4 1231 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 ENAHQ8N8S7 591 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 ATRIPQ8WXE1 791 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 WDR24Q96S15 920 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 LRWD1Q9UFC0 647 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 SLIT1O75093 1534 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 JCADQ9P266 1359 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 GSTO1P78417 241 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TBC1D8BQ0IIM8 1120 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC122Q5T0U0 273 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TRIML1Q8N9V2 468 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 SEPT11Q9NVA2 429 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 STK36Q9NRP7 1315 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 ERCC5P28715 1186 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CYP26C1Q6V0L0 522 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 RASGRP2Q7LDG7 609 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 RRP36Q96EU6 259 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 OVOS2A0A0G2JMS6 1433 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 PSMA7O14818 248 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TECP42680 631 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 TSG101Q99816 390 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 LUC7L2Q9Y383 392 aaKnown RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 POTEB2H3BUK9 544 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 MFAP3LO75121 409 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 BAG3O95817 575 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 LEKR1Q6ZMV7 388 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 CACNA2D4Q7Z3S7 1137 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 PNMA1Q8ND90 353 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 ARPP21Q9UBL0 812 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-202ENST00000398417 PCDHA4Q9UN74 947 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 PNPLA7Q6ZV29 1317 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 SMCO2A6NFE2 343 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 EFCAB8A8MWE9 144 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 EIF3JO75822 258 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 CNGA4Q8IV77 575 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 SLC44A5Q8NCS7 719 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 SH3RF3Q8TEJ3 882 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 MINPP1Q9UNW1 487 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PHLPP2Q6ZVD8 1323 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PREX1Q8TCU6 1659 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ZSCAN20P17040 1043 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 KRT31Q15323 416 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 TBC1D9BQ66K14 1250 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 BBXQ8WY36 941 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 GBP3Q9H0R5 595 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ZCCHC17Q9NP64 241 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 B4DLN1 442 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 AKR1B10O60218 316 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 CYLC1P35663 651 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 GNAQP50148 359 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 INTS5Q6P9B9 1019 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 TMTC1Q8IUR5 882 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ANKRD13CQ8N6S4 541 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ZNF512BQ96KM6 892 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 SLC39A2Q9NP94 309 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 TBC1D7Q9P0N9 293 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ADGRG1Q9Y653 693 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 SIGLEC1Q9BZZ2 1709 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 NWD1Q149M9 1564 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ACTN4O43707 911 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 MRPS25P82663 173 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 COA7Q96BR5 231 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ABCB6Q9NP58 842 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 JADE2Q9NQC1 790 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PCDHA6Q9UN73 950 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PCDHA8Q9Y5H6 950 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PPARDQ03181 441 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PKN1Q16512 942 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 NCAPH2Q6IBW4 605 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PYM1Q9BRP8 204 aaKnown RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 PRDM4Q9UKN5 801 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 MYO1BO43795 1136 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 SETQ01105 290 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-202ENST00000398417 DPYDQ12882 1025 aa5.53□□□□□ -1.52
SMAD4-202ENST00000398417 TMEM266Q2M3C6 531 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms