RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 CCDC196A0A1B0GTZ2 297 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 PLCD1P51178 756 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 C1orf53Q5VUE5 145 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 MSL1Q68DK7 614 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ARHGAP27Q6ZUM4 889 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ZNF710Q8N1W2 664 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 SIL1Q9H173 461 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ZNF213O14771 459 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ATG7O95352 703 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 MAP2K2P36507 400 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 NFIL3Q16649 462 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 NT5DC1Q5TFE4 455 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 RPAINQ86UA6 219 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ERO1BQ86YB8 467 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 AS3MTQ9HBK9 375 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 BRPF3Q9ULD4 1205 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 AGTPBP1Q9UPW5 1226 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 CYP46A1Q9Y6A2 500 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 SLC4A4Q9Y6R1 1079 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 VEGFAP15692 232 aaPredicted RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 JAG1P78504 1218 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 DLGAP5Q15398 846 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 BRAPQ7Z569 592 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 TEX11Q8IYF3 940 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 CDCA5Q96FF9 252 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 BARHL2Q9NY43 387 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 BCS1LQ9Y276 419 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 TAF6LQ9Y6J9 622 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 SYNGAP1Q96PV0 1343 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 CDKL5O76039 1030 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 XRCC5P13010 732 aaKnown RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ZKSCAN1P17029 563 aaPredicted RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ANP32AP39687 249 aaKnown RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 MORN1Q5T089 497 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ARL6IP4Q66PJ3 421 aaKnown RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 OLFM4Q6UX06 510 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 SESTD1Q86VW0 696 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 DZIP1Q86YF9 867 aaKnown RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 JARID2Q92833 1246 aaPredicted RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 ZSCAN16Q9H4T2 348 aaPredicted RBP4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 USP40Q9NVE5 1235 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 POLR3EQ9NVU0 708 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 TPCN1Q9ULQ1 816 aa4.28□□□□□ -1.72
FNDC3A-202ENST00000398316 CCDC85CA6NKD9 419 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 HLA-DOAP06340 250 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 CST5P28325 142 aaPredicted RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 DYNLL1P63167 89 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 NFIAQ12857 509 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 RESTQ13127 1097 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 ANKRD13AQ8IZ07 590 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 SMC1BQ8NDV3 1235 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 DNERQ8NFT8 737 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 WASF1Q92558 559 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 FGD4Q96M96 766 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 ARMT1Q9H993 441 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 ZDHHC9Q9Y397 364 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 H7C1D1 291 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 RANBP6O60518 1105 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 DSG3P32926 999 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 BACE1P56817 501 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 CHST13Q8NET6 341 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 SEC62Q99442 399 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 GTPBP4Q9BZE4 634 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 PLXNA3P51805 1871 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 A0A1W2PQ27 194 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 A0A1W2PQ64 194 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 A0A1W2PQD8 194 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 STXBP3O00186 592 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 MAFGO15525 162 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 PPP6R2O75170 966 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 ICAM1P05362 532 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 PTMAP06454 111 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 FMR1Q06787 632 aaKnown RBP eCLIP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 MAP3K21Q5TCX8 1036 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 BICDL1Q6ZP65 573 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 MFSD6Q6ZSS7 791 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 WNK4Q96J92 1243 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 TMEM47Q9BQJ4 181 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 MAGEF1Q9HAY2 307 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 DENND4AQ7Z401 1863 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 USP17L5A8MUK1 530 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 MYL1P05976 194 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 CALRP27797 417 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 TNNT3P45378 269 aaPredicted RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 USP11P51784 963 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 AK2P54819 239 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 CST9Q5W186 159 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 TRIM44Q96DX7 344 aaPredicted RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 EDC3Q96F86 508 aaKnown RBP4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 IWS1Q96ST2 819 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 EMILIN3Q9NT22 766 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 PPP1R9AQ9ULJ8 1098 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 ATP8B3O60423 1300 aa4.27□□□□□ -1.73
FNDC3A-202ENST00000398316 SMCHD1A6NHR9 2005 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms