RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CDK8P49336 464 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 MFSD14BQ5SR56 506 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 VSTM4Q8IW00 320 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 CCAR2Q8N163 923 aaKnown RBP19.13■□□□□ 0.65
NUP50-202ENST00000396096 SLC44A5Q8NCS7 719 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 NEDD1Q8NHV4 660 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 DPF2Q92785 391 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 PAGE5Q96GU1 130 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 MAP7D2Q96T17 732 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 PAXBP1Q9Y5B6 917 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 FLT1P17948 1338 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 RIOK3O14730 519 aaKnown RBP19.12■□□□□ 0.65
NUP50-202ENST00000396096 NOVP48745 357 aa19.12■□□□□ 0.65
NUP50-202ENST00000396096 HSP90AA2PQ14568 343 aaPredicted RBP19.12■□□□□ 0.65
NUP50-202ENST00000396096 SLC35G1Q2M3R5 365 aa19.12■□□□□ 0.65
NUP50-202ENST00000396096 CCDC148Q8NFR7 591 aa19.12■□□□□ 0.65
NUP50-202ENST00000396096 SAP30BPQ9UHR5 308 aaKnown RBP19.12■□□□□ 0.65
NUP50-202ENST00000396096 ADAMTS3O15072 1205 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 FMR1Q06787 632 aaKnown RBP eCLIP19.11■□□□□ 0.65
NUP50-202ENST00000396096 DPYDQ12882 1025 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 E2F4Q16254 413 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 KRT27Q7Z3Y8 459 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 C4orf32Q8N8J7 132 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 GSDMAQ96QA5 445 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 SUGT1Q9Y2Z0 365 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 VWA3AA6NCI4 1184 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 MTERF4Q7Z6M4 381 aaKnown RBP19.11■□□□□ 0.65
NUP50-202ENST00000396096 EYA3Q99504 573 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 SPZ1Q9BXG8 430 aa19.11■□□□□ 0.65
NUP50-202ENST00000396096 USP27XA6NNY8 438 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
NUP50-202ENST00000396096 CTIFO43310 598 aaKnown RBP19.1■□□□□ 0.65
NUP50-202ENST00000396096 CYTH3O43739 400 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 NRDCO43847 1150 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 SMARCA1P28370 1054 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 CFAP100Q494V2 611 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 GPKOWQ92917 476 aaPredicted RBP eCLIP19.1■□□□□ 0.65
NUP50-202ENST00000396096 MED15Q96RN5 788 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 PDCL3Q9H2J4 239 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 BARHL2Q9NY43 387 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 NFE2L3Q9Y4A8 694 aa19.1■□□□□ 0.65
NUP50-202ENST00000396096 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
NUP50-202ENST00000396096 LONP1P36776 959 aaKnown RBP19.09■□□□□ 0.65
NUP50-202ENST00000396096 IL17AQ16552 155 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 ZNF827Q17R98 1081 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 WWC2Q6AWC2 1192 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 TYW1BQ6NUM6 668 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 IQUBQ8NA54 791 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 CCDC112Q8NEF3 446 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 COA1Q9GZY4 146 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 ATP6V0A2Q9Y487 856 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 PLIN4Q96Q06 1357 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 KIF2AO00139 706 aaPredicted RBP19.09■□□□□ 0.65
NUP50-202ENST00000396096 STXBP3O00186 592 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 TRIM37O94972 964 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 MCM7P33993 719 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 CEP135Q66GS9 1140 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 PROM2Q8N271 834 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 TMX1Q9H3N1 280 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 INTS13Q9NVM9 706 aa19.09■□□□□ 0.65
NUP50-202ENST00000396096 C6orf229H3BNL8 230 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 RBM10P98175 930 aaKnown RBP19.08■□□□□ 0.65
NUP50-202ENST00000396096 PTPN14Q15678 1187 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 TXNRD1Q16881 649 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 PDXDC2PQ6P474 469 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 PCDHA6Q9UN73 950 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 DAGLAQ9Y4D2 1042 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 PCDHA8Q9Y5H6 950 aa19.08■□□□□ 0.65
NUP50-202ENST00000396096 TOP1P11387 765 aaKnown RBP19.07■□□□□ 0.64
NUP50-202ENST00000396096 AFMP43652 599 aa19.07■□□□□ 0.64
NUP50-202ENST00000396096 TBX2Q13207 712 aaPredicted RBP19.07■□□□□ 0.64
NUP50-202ENST00000396096 CUL4BQ13620 913 aa19.07■□□□□ 0.64
NUP50-202ENST00000396096 E4F1Q66K89 784 aaPredicted RBP19.07■□□□□ 0.64
NUP50-202ENST00000396096 CCDC194A0A1B0GVG4 234 aa19.07■□□□□ 0.64
NUP50-202ENST00000396096 KLRF2D3W0D1 207 aa19.07■□□□□ 0.64
NUP50-202ENST00000396096 C10orf71Q711Q0 1435 aa19.06■□□□□ 0.64
NUP50-202ENST00000396096 TMEM232C9JQI7 657 aa19.06■□□□□ 0.64
NUP50-202ENST00000396096 PARP1P09874 1014 aaKnown RBP19.06■□□□□ 0.64
NUP50-202ENST00000396096 SPATA1Q5VX52 437 aa19.06■□□□□ 0.64
NUP50-202ENST00000396096 ZMYND12Q9H0C1 365 aa19.06■□□□□ 0.64
NUP50-202ENST00000396096 LAD1O00515 517 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
NUP50-202ENST00000396096 GTF2IP78347 998 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 SYCP1Q15431 976 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 HEATR3Q7Z4Q2 680 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 TRMT44Q8IYL2 757 aaKnown RBP19.05■□□□□ 0.64
NUP50-202ENST00000396096 NLGN1Q8N2Q7 840 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 CCDC12Q8WUD4 166 aaPredicted RBP19.05■□□□□ 0.64
NUP50-202ENST00000396096 MYH8P13535 1937 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 PPP1R3GB7ZBB8 358 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 TUBB4AP04350 444 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 SRGNP10124 158 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 NPR1P16066 1061 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 CD44P16070 742 aaKnown RBP19.05■□□□□ 0.64
NUP50-202ENST00000396096 GABPAQ06546 454 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 CEP95Q96GE4 821 aa19.05■□□□□ 0.64
NUP50-202ENST00000396096 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 CCP110O43303 1012 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 CDK11BP21127 795 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms