RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 FAM207AQ9NSI2 230 aaPredicted RBP18.05■□□□□ 0.48
PDZD4-202ENST00000393758 FAM217BQ9NTX9 383 aaPredicted RBP18.05■□□□□ 0.48
PDZD4-202ENST00000393758 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 SGMS1Q86VZ5 419 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDZD4-202ENST00000393758 GOLGA6BA6NDN3 693 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 RPN1P04843 607 aaKnown RBP18.05■□□□□ 0.48
PDZD4-202ENST00000393758 EPS15P42566 896 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 MNAT1P51948 309 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 FAM71BQ8TC56 605 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 NOC4LQ9BVI4 516 aaKnown RBP18.05■□□□□ 0.48
PDZD4-202ENST00000393758 TCP11L1Q9NUJ3 509 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
PDZD4-202ENST00000393758 PARP1P09874 1014 aaKnown RBP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 USP5P45974 858 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 LIG3P49916 1009 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 C2orf54Q08AI8 447 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 TYW1BQ6NUM6 668 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ZSCAN10Q96SZ4 725 aaPredicted RBP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ERVV-2B6SEH9 535 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 SMIM22K7EJ46 135 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 EBAG9O00559 213 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 CCT5P48643 541 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 BEND6Q5SZJ8 279 aaPredicted RBP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 CCDC51Q96ER9 411 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ANKZF1Q9H8Y5 726 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 BCCIPQ9P287 314 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 NMT2O60551 498 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ZNF18P17022 549 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 PDE4DQ08499 809 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 HLTFQ14527 1009 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 ACSBG1Q96GR2 724 aa18.04■□□□□ 0.48
PDZD4-202ENST00000393758 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDZD4-202ENST00000393758 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 TTC26A0AVF1 554 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 TBX2Q13207 712 aaPredicted RBP18.03■□□□□ 0.48
PDZD4-202ENST00000393758 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 PP2D1A8MPX8 630 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 TACC1O75410 805 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 CCDC152Q4G0S7 254 aa18.03■□□□□ 0.48
PDZD4-202ENST00000393758 EARS2Q5JPH6 523 aaKnown RBP18.03■□□□□ 0.48
PDZD4-202ENST00000393758 IPO4Q8TEX9 1081 aaKnown RBP18.03■□□□□ 0.48
PDZD4-202ENST00000393758 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 A0A087X0B3 334 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 ZNF185O15231 689 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 ATP1A1P05023 1023 aaKnown RBP18.02■□□□□ 0.48
PDZD4-202ENST00000393758 ATP1A2P50993 1020 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 TUBB2AQ13885 445 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 PTPROQ16827 1216 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 ODF2Q5BJF6 829 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 SRLQ86TD4 932 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 TUBB2BQ9BVA1 445 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 ERVK-24P63145 666 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 TCP11X2Q5H9J9 407 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 KCTD16Q68DU8 428 aa18.02■□□□□ 0.48
PDZD4-202ENST00000393758 RNF26Q9BY78 433 aaPredicted RBP18.02■□□□□ 0.48
PDZD4-202ENST00000393758 MAATS1Q7Z4T9 603 aa18.02■□□□□ 0.47
PDZD4-202ENST00000393758 C2CD5Q86YS7 1000 aa18.02■□□□□ 0.47
PDZD4-202ENST00000393758 HAUS4Q9H6D7 363 aa18.02■□□□□ 0.47
PDZD4-202ENST00000393758 ATP2C2O75185 946 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 PRCPP42785 496 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 TRIM14Q14142 442 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 SECISBP2LQ93073 1101 aaKnown RBP18.01■□□□□ 0.47
PDZD4-202ENST00000393758 MMS19Q96T76 1030 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 SAMM50Q9Y512 469 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 MEGF6O75095 1541 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 TUBB4BP68371 445 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 INF2Q27J81 1249 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
PDZD4-202ENST00000393758 HSF2BPO75031 334 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 KIF5BP33176 963 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 E2F4Q16254 413 aa18.01■□□□□ 0.47
PDZD4-202ENST00000393758 EIF3CLB5ME19 914 aaKnown RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 TUBBP07437 444 aa18■□□□□ 0.47
PDZD4-202ENST00000393758 DZIP1Q86YF9 867 aaKnown RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 BCAS4Q8TDM0 211 aa18■□□□□ 0.47
PDZD4-202ENST00000393758 EIF3CQ99613 913 aaKnown RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 LRRIQ3A6PVS8 624 aaPredicted RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 SF3A3Q12874 501 aaKnown RBP eCLIP18■□□□□ 0.47
PDZD4-202ENST00000393758 DYMQ7RTS9 669 aa18■□□□□ 0.47
PDZD4-202ENST00000393758 SMCR8Q8TEV9 937 aaPredicted RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 CADPS2Q86UW7 1296 aa18■□□□□ 0.47
PDZD4-202ENST00000393758 ENAHQ8N8S7 591 aaPredicted RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 ZNF579Q8NAF0 562 aaKnown RBP18■□□□□ 0.47
PDZD4-202ENST00000393758 MED4Q9NPJ6 270 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms