RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 KLRC3Q07444 240 aa27.46■■□□□ 1.99
HMGA2-202ENST00000393577 MORN1Q5T089 497 aa27.46■■□□□ 1.99
HMGA2-202ENST00000393577 SPATC1LQ9H0A9 340 aa27.46■■□□□ 1.99
HMGA2-202ENST00000393577 RANBP6O60518 1105 aaKnown RBP27.45■■□□□ 1.98
HMGA2-202ENST00000393577 HMGCRP04035 888 aa27.45■■□□□ 1.98
HMGA2-202ENST00000393577 HAND2P61296 217 aa27.45■■□□□ 1.98
HMGA2-202ENST00000393577 TRIB2Q92519 343 aa27.45■■□□□ 1.98
HMGA2-202ENST00000393577 MKL1Q969V6 931 aa27.45■■□□□ 1.98
HMGA2-202ENST00000393577 MOV10L1Q9BXT6 1211 aaKnown RBP27.45■■□□□ 1.98
HMGA2-202ENST00000393577 ORC4O43929 436 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 RGS2P41220 211 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 PLS1Q14651 629 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 USP6NLQ92738 828 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 TOMM22Q9NS69 142 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 PPP1R9AQ9ULJ8 1098 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 IVNS1ABPQ9Y6Y0 642 aa27.44■■□□□ 1.98
HMGA2-202ENST00000393577 MKI67P46013 3256 aaKnown RBP27.43■■□□□ 1.98
HMGA2-202ENST00000393577 GJB1P08034 283 aa27.43■■□□□ 1.98
HMGA2-202ENST00000393577 XRCC5P13010 732 aaKnown RBP27.43■■□□□ 1.98
HMGA2-202ENST00000393577 PTPREP23469 700 aa27.43■■□□□ 1.98
HMGA2-202ENST00000393577 SYNPO2Q9UMS6 1093 aa27.43■■□□□ 1.98
HMGA2-202ENST00000393577 LAMA4Q16363 1823 aa27.43■■□□□ 1.98
HMGA2-202ENST00000393577 NMT2O60551 498 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 FGRP09769 529 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 TRIM32Q13049 653 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 MAP2K5Q13163 448 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 RRP12Q5JTH9 1297 aaKnown RBP27.42■■□□□ 1.98
HMGA2-202ENST00000393577 GMCL1P1Q8NEA9 526 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 SHISA4Q96DD7 197 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 APBA2Q99767 749 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 ADAMTS5Q9UNA0 930 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 PDE4DIPQ5VU43 2346 aa27.42■■□□□ 1.98
HMGA2-202ENST00000393577 SLC15A5A6NIM6 579 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 ERCC3P19447 782 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 GJA8P48165 433 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 TMEM132BQ14DG7 1078 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 PPP4R3BQ5MIZ7 849 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 SHCBP1Q8NEM2 672 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 NKX2-3Q8TAU0 364 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 SLF1Q9BQI6 1058 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 NBPF3Q9H094 633 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 IL17RBQ9NRM6 502 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 STX8Q9UNK0 236 aa27.41■■□□□ 1.98
HMGA2-202ENST00000393577 VWA5AO00534 786 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 ZKSCAN1P17029 563 aaPredicted RBP27.4■■□□□ 1.98
HMGA2-202ENST00000393577 GRB14Q14449 540 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 CCL14Q16627 93 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 SLFN13Q68D06 897 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 TBC1D10CQ8IV04 446 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 IL25Q9H293 177 aa27.4■■□□□ 1.98
HMGA2-202ENST00000393577 AKNAD1Q5T1N1 836 aa27.39■■□□□ 1.98
HMGA2-202ENST00000393577 NCAPG2Q86XI2 1143 aa27.39■■□□□ 1.98
HMGA2-202ENST00000393577 TRMT44Q8IYL2 757 aaKnown RBP27.39■■□□□ 1.98
HMGA2-202ENST00000393577 U2AF1L4Q8WU68 220 aaKnown RBP27.39■■□□□ 1.98
HMGA2-202ENST00000393577 ZNF236Q9UL36 1845 aa27.39■■□□□ 1.97
HMGA2-202ENST00000393577 MFSD6Q6ZSS7 791 aa27.38■■□□□ 1.97
HMGA2-202ENST00000393577 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
HMGA2-202ENST00000393577 DSCC1Q9BVC3 393 aa27.38■■□□□ 1.97
HMGA2-202ENST00000393577 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.38■■□□□ 1.97
HMGA2-202ENST00000393577 PAK6Q9NQU5 681 aaPredicted RBP27.38■■□□□ 1.97
HMGA2-202ENST00000393577 ZNF213O14771 459 aa27.37■■□□□ 1.97
HMGA2-202ENST00000393577 REPS2Q8NFH8 660 aa27.37■■□□□ 1.97
HMGA2-202ENST00000393577 CHMP4CQ96CF2 233 aa27.37■■□□□ 1.97
HMGA2-202ENST00000393577 DEFB118Q96PH6 123 aa27.37■■□□□ 1.97
HMGA2-202ENST00000393577 MROH8Q9H579 483 aa27.37■■□□□ 1.97
HMGA2-202ENST00000393577 ISY1Q9ULR0 285 aaKnown RBP27.37■■□□□ 1.97
HMGA2-202ENST00000393577 SGPL1O95470 568 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 SLC25A27O95847 323 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 PCP11498 1178 aaKnown RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 BMP3P12645 472 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 PRKAR2AP13861 404 aaKnown RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 ADORA2AP29274 412 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 PRPF38AQ8NAV1 312 aaKnown RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 KIFC2Q96AC6 838 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 RNF41Q9H4P4 317 aaPredicted RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 HMX1Q9NP08 348 aaPredicted RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 FEM1BQ9UK73 627 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 ZNF214Q9UL59 606 aaPredicted RBP27.36■■□□□ 1.97
HMGA2-202ENST00000393577 RPTORQ8N122 1335 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 RAD50Q92878 1312 aa27.36■■□□□ 1.97
HMGA2-202ENST00000393577 STRNO43815 780 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 STAT3P40763 770 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 RIOX2Q8IUF8 465 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 NPLOC4Q8TAT6 608 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 FLRT1Q9NZU1 646 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 NEDD4P46934 1319 aa27.35■■□□□ 1.97
HMGA2-202ENST00000393577 HOXC6P09630 235 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 CHMLP26374 656 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 NOVP48745 357 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 MAP3K21Q5TCX8 1036 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 CENPQQ7L2Z9 268 aaPredicted RBP27.34■■□□□ 1.97
HMGA2-202ENST00000393577 DPP9Q86TI2 863 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 GMCL1Q96IK5 515 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 MTMR7Q9Y216 660 aa27.34■■□□□ 1.97
HMGA2-202ENST00000393577 ZNFX1Q9P2E3 1918 aaKnown RBP27.33■■□□□ 1.97
HMGA2-202ENST00000393577 MCCP23508 829 aa27.33■■□□□ 1.97
HMGA2-202ENST00000393577 SLC1A4P43007 532 aa27.33■■□□□ 1.97
HMGA2-202ENST00000393577 CACNB2Q08289 660 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-202ENST00000393577 RASGRP2Q7LDG7 609 aa27.33■■□□□ 1.97
HMGA2-202ENST00000393577 RUFY2Q8WXA3 655 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms