RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 SLURP2P0DP57 97 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 EIF6P56537 245 aaKnown RBP24.67■■□□□ 1.54
GMDS-202ENST00000380815 SPDYE2Q495Y8 402 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 FKBP1CQ5VVH2 108 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 CIAPIN1Q6FI81 312 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 GALNT17Q6IS24 598 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 CLEC10AQ8IUN9 316 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 CCDC148Q8NFR7 591 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 BARHL2Q9NY43 387 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 CUTAO60888 179 aa24.66■■□□□ 1.54
GMDS-202ENST00000380815 NDUFA8P51970 172 aa24.66■■□□□ 1.54
GMDS-202ENST00000380815 ANP32BQ92688 251 aaKnown RBP24.66■■□□□ 1.54
GMDS-202ENST00000380815 GPKOWQ92917 476 aaPredicted RBP eCLIP24.66■■□□□ 1.54
GMDS-202ENST00000380815 KANSL2Q9H9L4 492 aa24.66■■□□□ 1.54
GMDS-202ENST00000380815 NOL7Q9UMY1 257 aaKnown RBP24.66■■□□□ 1.54
GMDS-202ENST00000380815 BCS1LQ9Y276 419 aa24.66■■□□□ 1.54
GMDS-202ENST00000380815 PCDHB6Q9Y5E3 794 aa24.66■■□□□ 1.54
GMDS-202ENST00000380815 FAM196BA6NMK8 535 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 MMP14P50281 582 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 EARS2Q5JPH6 523 aaKnown RBP24.65■■□□□ 1.54
GMDS-202ENST00000380815 WWC2Q6AWC2 1192 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 CKAP2LQ8IYA6 745 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 KRI1Q8N9T8 703 aaKnown RBP24.65■■□□□ 1.54
GMDS-202ENST00000380815 RNF214Q8ND24 703 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 FAM151AQ8WW52 585 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 MKL1Q969V6 931 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 RRP36Q96EU6 259 aaKnown RBP24.65■■□□□ 1.54
GMDS-202ENST00000380815 CSRNP1Q96S65 589 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 RIOX1Q9H6W3 641 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 PCDHA4Q9UN74 947 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 FAM237AA0A1B0GTK4 181 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 TRIM75PA6NK02 468 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 TNIP1Q15025 636 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 DAGLBQ8NCG7 672 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 NYAP2Q9P242 653 aa24.65■■□□□ 1.54
GMDS-202ENST00000380815 PSDA5PKW4 1024 aaPredicted RBP24.64■■□□□ 1.53
GMDS-202ENST00000380815 FAM205CA6NFA0 338 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 TCP10L2B9ZVM9 353 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 STXBP3O00186 592 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 TRAPPC10P48553 1259 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 TMEM179Q6ZVK1 233 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 HEATR3Q7Z4Q2 680 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 BLIDQ8IZY5 108 aa24.64■■□□□ 1.53
GMDS-202ENST00000380815 ZBED3Q96IU2 234 aaPredicted RBP24.64■■□□□ 1.53
GMDS-202ENST00000380815 HERC5Q9UII4 1024 aaKnown RBP24.64■■□□□ 1.53
GMDS-202ENST00000380815 CLRN2A0PK11 232 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 BMP15O95972 392 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 PFKFB1P16118 471 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 TYRO3Q06418 890 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 ZNF543Q08ER8 600 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 RESP18Q5W5W9 173 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 TYW1BQ6NUM6 668 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 SHC4Q6S5L8 630 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 CCDC12Q8WUD4 166 aaPredicted RBP24.63■■□□□ 1.53
GMDS-202ENST00000380815 CPVLQ9H3G5 476 aa24.63■■□□□ 1.53
GMDS-202ENST00000380815 SEC63Q9UGP8 760 aaKnown RBP24.63■■□□□ 1.53
GMDS-202ENST00000380815 PTPREP23469 700 aa24.62■■□□□ 1.53
GMDS-202ENST00000380815 UVSSAQ2YD98 709 aa24.62■■□□□ 1.53
GMDS-202ENST00000380815 HPSEQ9Y251 543 aa24.62■■□□□ 1.53
GMDS-202ENST00000380815 FRMPD2Q68DX3 1309 aaPredicted RBP24.62■■□□□ 1.53
GMDS-202ENST00000380815 ABCB5Q2M3G0 1257 aa24.62■■□□□ 1.53
GMDS-202ENST00000380815 GPATCH4Q5T3I0 446 aaKnown RBP24.62■■□□□ 1.53
GMDS-202ENST00000380815 FBXO2Q9UK22 296 aaPredicted RBP24.62■■□□□ 1.53
GMDS-202ENST00000380815 CNTNAP1P78357 1384 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 hCG_1984214I3L0E3 225 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 M0R2N6 131 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 MYO1BO43795 1136 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 ZNF202O95125 648 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 EEF2P13639 858 aaKnown RBP24.61■■□□□ 1.53
GMDS-202ENST00000380815 ATP2B1P20020 1258 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 ATP2B2Q01814 1243 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 SASS6Q6UVJ0 657 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 ZNF713Q8N859 430 aaPredicted RBP24.61■■□□□ 1.53
GMDS-202ENST00000380815 ZNF579Q8NAF0 562 aaKnown RBP24.61■■□□□ 1.53
GMDS-202ENST00000380815 CLIC6Q96NY7 704 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 UBA5Q9GZZ9 404 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 ZMYND12Q9H0C1 365 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 SRPRBQ9Y5M8 271 aaKnown RBP24.61■■□□□ 1.53
GMDS-202ENST00000380815 MYH4Q9Y623 1939 aa24.61■■□□□ 1.53
GMDS-202ENST00000380815 RPS12P25398 132 aaKnown RBP24.6■■□□□ 1.53
GMDS-202ENST00000380815 PIK3AP1Q6ZUJ8 805 aa24.6■■□□□ 1.53
GMDS-202ENST00000380815 FAM83AQ86UY5 434 aa24.6■■□□□ 1.53
GMDS-202ENST00000380815 TIGD1Q96MW7 591 aa24.6■■□□□ 1.53
GMDS-202ENST00000380815 PIGSQ96S52 555 aa24.6■■□□□ 1.53
GMDS-202ENST00000380815 MRVI1Q9Y6F6 885 aa24.6■■□□□ 1.53
GMDS-202ENST00000380815 CCDC173Q0VFZ6 552 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 SEPT2Q15019 361 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 NOM1Q5C9Z4 860 aaKnown RBP24.59■■□□□ 1.53
GMDS-202ENST00000380815 TTC38Q5R3I4 469 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 HOMER1Q86YM7 354 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 SDF4Q9BRK5 362 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 VAT1LQ9HCJ6 419 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 MYOZ2Q9NPC6 264 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 SYKP43405 635 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 ICA1Q05084 483 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 SHROOM1Q2M3G4 852 aaPredicted RBP24.59■■□□□ 1.53
GMDS-202ENST00000380815 RBM26Q5T8P6 1007 aaKnown RBP24.59■■□□□ 1.53
GMDS-202ENST00000380815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.59■■□□□ 1.531e-7■■■■□ 26
GMDS-202ENST00000380815 VEZTQ9HBM0 779 aa24.59■■□□□ 1.53
GMDS-202ENST00000380815 WNT10BO00744 389 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms