RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SBK1Q52WX2 424 aa20.21■□□□□ 0.83
SMN2-201ENST00000380741 ABRAQ8N0Z2 381 aa20.21■□□□□ 0.83
SMN2-201ENST00000380741 APPBP2Q92624 585 aa20.21■□□□□ 0.83
SMN2-201ENST00000380741 SENP6Q9GZR1 1112 aaPredicted RBP20.21■□□□□ 0.83
SMN2-201ENST00000380741 GOPCQ9HD26 462 aa20.21■□□□□ 0.83
SMN2-201ENST00000380741 ADAMTS5Q9UNA0 930 aa20.21■□□□□ 0.83
SMN2-201ENST00000380741 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 RNF113AO15541 343 aaKnown RBP20.2■□□□□ 0.82
SMN2-201ENST00000380741 RAD21O60216 631 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 SLC5A4Q9NY91 659 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 ROBO3Q96MS0 1386 aa20.2■□□□□ 0.82
SMN2-201ENST00000380741 MYH4Q9Y623 1939 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 DNM1LO00429 736 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 GPAA1O43292 621 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 RASA1P20936 1047 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
SMN2-201ENST00000380741 PPP1R9AQ9ULJ8 1098 aa20.19■□□□□ 0.82
SMN2-201ENST00000380741 M0R2C6 588 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 SLC25A27O95847 323 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 FCER1AP12319 257 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
SMN2-201ENST00000380741 LAMA2P24043 3122 aaKnown RBP20.18■□□□□ 0.82
SMN2-201ENST00000380741 VWA5AO00534 786 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 SEPT4O43236 478 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 ZFYP08048 801 aaPredicted RBP20.17■□□□□ 0.82
SMN2-201ENST00000380741 ATN1P54259 1190 aaPredicted RBP20.17■□□□□ 0.82
SMN2-201ENST00000380741 PRAMEF19Q5SWL8 479 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 GJC2Q5T442 439 aaPredicted RBP20.17■□□□□ 0.82
SMN2-201ENST00000380741 RIOX2Q8IUF8 465 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 TDHQ8IZJ6 230 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 UBE2OQ9C0C9 1292 aaKnown RBP20.17■□□□□ 0.82
SMN2-201ENST00000380741 ZNF214Q9UL59 606 aaPredicted RBP20.17■□□□□ 0.82
SMN2-201ENST00000380741 PCDHB15Q9Y5E8 787 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
SMN2-201ENST00000380741 STAT3P40763 770 aa20.16■□□□□ 0.82
SMN2-201ENST00000380741 TDO2P48775 406 aa20.16■□□□□ 0.82
SMN2-201ENST00000380741 MMP19Q99542 508 aa20.16■□□□□ 0.82
SMN2-201ENST00000380741 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
SMN2-201ENST00000380741 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
SMN2-201ENST00000380741 PGK2P07205 417 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 GNAT2P19087 354 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 MDM2Q00987 491 aaPredicted RBP20.15■□□□□ 0.82
SMN2-201ENST00000380741 ARRDC4Q8NCT1 418 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 PI4K2BQ8TCG2 481 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
SMN2-201ENST00000380741 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 NYAP2Q9P242 653 aa20.15■□□□□ 0.82
SMN2-201ENST00000380741 F5H6K3 240 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 PRDM1O75626 825 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 NDUFB10O96000 172 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 APPP05067 770 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 KLRC3Q07444 240 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
SMN2-201ENST00000380741 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.81
SMN2-201ENST00000380741 LTBP2Q14767 1821 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 IGKV6D-41A0A0C4DH26 115 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 KBTBD13C9JR72 458 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 RTP1P59025 263 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 KCTD2Q14681 263 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 LRRFIP1Q32MZ4 808 aaKnown RBP20.13■□□□□ 0.81
SMN2-201ENST00000380741 FAM47AQ5JRC9 791 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 IFNL3Q8IZI9 196 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 CLIP2Q9UDT6 1046 aa20.13■□□□□ 0.81
SMN2-201ENST00000380741 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
SMN2-201ENST00000380741 ERC2O15083 957 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
SMN2-201ENST00000380741 COPB2P35606 906 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 ZNF792Q3KQV3 632 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 GPR153Q6NV75 609 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
SMN2-201ENST00000380741 CEP95Q96GE4 821 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 TINF2Q9BSI4 451 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 ZNF287Q9HBT7 754 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 NRBP1Q9UHY1 535 aa20.12■□□□□ 0.81
SMN2-201ENST00000380741 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
SMN2-201ENST00000380741 LRRC41Q15345 812 aa20.11■□□□□ 0.81
SMN2-201ENST00000380741 SNRNP48Q6IEG0 339 aaKnown RBP20.11■□□□□ 0.81
SMN2-201ENST00000380741 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
SMN2-201ENST00000380741 TEX13BQ9BXU2 312 aa20.11■□□□□ 0.81
SMN2-201ENST00000380741 ATP11BQ9Y2G3 1177 aa20.11■□□□□ 0.81
SMN2-201ENST00000380741 MX1P20591 662 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 ZMYM1Q5SVZ6 1142 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 SLC39A5Q6ZMH5 540 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 LRRC47Q8N1G4 583 aaKnown RBP20.1■□□□□ 0.81
SMN2-201ENST00000380741 PRPF38AQ8NAV1 312 aaKnown RBP20.1■□□□□ 0.81
SMN2-201ENST00000380741 MKL1Q969V6 931 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 NACAP1Q9BZK3 213 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 MTMR4Q9NYA4 1195 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 RIPK3Q9Y572 518 aa20.1■□□□□ 0.81
SMN2-201ENST00000380741 PLIN4Q96Q06 1357 aa20.09■□□□□ 0.81
SMN2-201ENST00000380741 TAL1P17542 331 aaPredicted RBP20.09■□□□□ 0.81
SMN2-201ENST00000380741 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
SMN2-201ENST00000380741 SNX17Q15036 470 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms