RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 KCNJ14Q9UNX9 436 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 PASKQ96RG2 1323 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 FBXO41Q8TF61 875 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 ADCY9O60503 1353 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 DPH6Q7L8W6 267 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 TXLNGQ9NUQ3 528 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 SCOCQ9UIL1 159 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 FBXO38Q6PIJ6 1188 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 N4BP2L2Q92802 583 aaPredicted RBP18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
COL4A3BP-203ENST00000380494 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 THAP12O43422 761 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 BAG2O95816 211 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 PALM2Q8IXS6 379 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 TMEM87AQ8NBN3 555 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 A2MP01023 1474 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 CFAP61Q8NHU2 1237 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 RPSAP08865 295 aaKnown RBP18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 PSMD6Q15008 389 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 MYO1CO00159 1063 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 BUB1O43683 1085 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 CNGA1P29973 690 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
COL4A3BP-203ENST00000380494 DYMQ7RTS9 669 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 ERCC3P19447 782 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 RAD51AP2Q09MP3 1159 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 RASA3Q14644 834 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 MYOCDQ8IZQ8 938 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 CASP14P31944 242 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 ADCY8P40145 1251 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 POLR3EQ9NVU0 708 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 MAST1Q9Y2H9 1570 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 DBN1Q16643 649 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 TADA2BQ86TJ2 420 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 GSDMAQ96QA5 445 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 XRCC5P13010 732 aaKnown RBP18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 AKNAD1Q5T1N1 836 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 TTC19Q6DKK2 380 aaPredicted RBP18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 WHAMMQ8TF30 809 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 LSG1Q9H089 658 aaKnown RBP18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 DPH5Q9H2P9 285 aa18.78■□□□□ 0.6
COL4A3BP-203ENST00000380494 N4BP1O75113 896 aaKnown RBP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 SESN3P58005 492 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 PTH1RQ03431 593 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 CASP8Q14790 479 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 DCUN1D2Q6PH85 259 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 FNBP4Q8N3X1 1017 aaPredicted RBP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 SUCLG2Q96I99 432 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 ARHGEF35A5YM69 484 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 EEF1GP26641 437 aaKnown RBP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 TIMM10P62072 90 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 LRRC23Q53EV4 343 aaPredicted RBP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 KCTD16Q68DU8 428 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 PANX2Q96RD6 677 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 ATF2P15336 505 aa18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL4A3BP-203ENST00000380494 GCC2Q8IWJ2 1684 aa18.77■□□□□ 0.59
COL4A3BP-203ENST00000380494 HMGB1P1B2RPK0 211 aaPredicted RBP18.77■□□□□ 0.59
COL4A3BP-203ENST00000380494 EXOC3O60645 756 aa18.77■□□□□ 0.59
COL4A3BP-203ENST00000380494 NNTQ13423 1086 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 SARM1Q6SZW1 724 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 VSTM4Q8IW00 320 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 GUCY2CP25092 1073 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 HOXC9P31274 260 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 GALNT17Q6IS24 598 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 C11orf57Q6ZUT1 292 aaPredicted RBP18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 MRPL44Q9H9J2 332 aaKnown RBP18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 RBL2Q08999 1139 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 SF3A3Q12874 501 aaKnown RBP eCLIP18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 GIPC1O14908 333 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 KIF1CO43896 1103 aaKnown RBP18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 GCNT3O95395 438 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 STRN3Q13033 797 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 TAF11Q15544 211 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 USTQ9Y2C2 406 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 SKIP12755 728 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANKRD20A4Q4UJ75 823 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANKRD20A8PQ5CZ79 823 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANKRD20A2Q5SQ80 823 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 ANKRD20A1Q5TYW2 823 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 NCAPH2Q6IBW4 605 aa18.76■□□□□ 0.59
COL4A3BP-203ENST00000380494 PLEKHA4Q9H4M7 779 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms