RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ZC3H12CQ9C0D7 883 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 STAP2Q9UGK3 403 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 SOS2Q07890 1332 aaPredicted RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 IL9RQ01113 521 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 TTLL12Q14166 644 aaPredicted RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 MYOCDQ8IZQ8 938 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 CCHCR1Q8TD31 782 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 KRT12Q99456 494 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 POLR3EQ9NVU0 708 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 NT5C2P49902 561 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 CCDC117Q8IWD4 279 aaPredicted RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 RFC1P35251 1148 aaPredicted RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 CCDC13Q8IYE1 715 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PLIN2Q99541 437 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PDE11AQ9HCR9 933 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 ARPP21Q9UBL0 812 aaPredicted RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 MED23Q9ULK4 1368 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PICALMQ13492 652 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 SLFN12Q8IYM2 578 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 WHAMMQ8TF30 809 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 HOXC9P31274 260 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 EIF3BP55884 814 aaKnown RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 AKNAD1Q5T1N1 836 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 RPAINQ86UA6 219 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 CCDC170Q8IYT3 715 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PNMA2Q9UL42 364 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 KDRP35968 1356 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 ARHGAP31Q2M1Z3 1444 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 KDM5CP41229 1560 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
SNX1-202ENST00000380285 KCNK3O14649 394 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 MGEA5O60502 916 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 DRC3Q9H069 523 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 TXLNGQ9NUQ3 528 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 JRKLQ9Y4A0 524 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 ADCY9O60503 1353 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 EXOC3O60645 756 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 LMNB1P20700 586 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 TXKP42681 527 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 SEPT2Q15019 361 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PPP1R21Q6ZMI0 780 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 FBXO41Q8TF61 875 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 PFDN4Q9NQP4 134 aa10.53□□□□□ -0.72
SNX1-202ENST00000380285 TXNDC9O14530 226 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 SLC39A6Q13433 755 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 PTPRTO14522 1441 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 BACH1O14867 736 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 GCNT3O95395 438 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.72
SNX1-202ENST00000380285 SERTAD1Q9UHV2 236 aa10.52□□□□□ -0.72
SNX1-202ENST00000380285 RNASE9P60153 205 aaKnown RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 DBN1Q16643 649 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 TRMT1LQ7Z2T5 733 aaKnown RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 PALM2Q8IXS6 379 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 RSAD2Q8WXG1 361 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 DMRT2Q9Y5R5 561 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 AK8Q96MA6 479 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 DBNDD2Q9BQY9 259 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 ATP8A2Q9NTI2 1148 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 STK38LQ9Y2H1 464 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 DDAH1O94760 285 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 ITGA6P23229 1130 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 VPS37BQ9H9H4 285 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 JAK2O60674 1132 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 BANK1Q8NDB2 785 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 MAPK8IP1Q9UQF2 711 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 CUL4AQ13619 759 aa10.52□□□□□ -0.73
SNX1-202ENST00000380285 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 FAM207AQ9NSI2 230 aaPredicted RBP10.52□□□□□ -0.73
SNX1-202ENST00000380285 LRRC8CQ8TDW0 803 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 PBKQ96KB5 322 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
SNX1-202ENST00000380285 MYOM2P54296 1465 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 DAPK3O43293 454 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 OPHN1O60890 802 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 ABCD1P33897 745 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 LIG3P49916 1009 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 NBPF9Q3BBW0 867 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 MYCT1Q8N699 235 aa10.51□□□□□ -0.73
SNX1-202ENST00000380285 PANX2Q96RD6 677 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms