RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
PRPF18-202ENST00000378572 ATG4CQ96DT6 458 aa16.38■□□□□ 0.21
PRPF18-202ENST00000378572 GDF15Q99988 308 aa16.38■□□□□ 0.21
PRPF18-202ENST00000378572 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
PRPF18-202ENST00000378572 SLC5A4Q9NY91 659 aa16.38■□□□□ 0.21
PRPF18-202ENST00000378572 A0A0G2JMZ2 1700 aa16.37■□□□□ 0.21
PRPF18-202ENST00000378572 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
PRPF18-202ENST00000378572 HOXC6P09630 235 aa16.37■□□□□ 0.21
PRPF18-202ENST00000378572 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
PRPF18-202ENST00000378572 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
PRPF18-202ENST00000378572 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
PRPF18-202ENST00000378572 TMX2Q9Y320 296 aa16.37■□□□□ 0.21
PRPF18-202ENST00000378572 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 STRNO43815 780 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 COL6A1P12109 1028 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 DSG3P32926 999 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 ANO1Q5XXA6 986 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 C16orf86Q6ZW13 317 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 SHCBP1Q8NEM2 672 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
PRPF18-202ENST00000378572 SZT2Q5T011 3432 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 EEF2P13639 858 aaKnown RBP16.36■□□□□ 0.21
PRPF18-202ENST00000378572 BMP8BP34820 402 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
PRPF18-202ENST00000378572 TSHZ3Q63HK5 1081 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 PUS7LQ9H0K6 701 aaKnown RBP16.36■□□□□ 0.21
PRPF18-202ENST00000378572 MROH8Q9H579 483 aa16.36■□□□□ 0.21
PRPF18-202ENST00000378572 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 KBTBD13C9JR72 458 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 SDSP20132 328 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
PRPF18-202ENST00000378572 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 MKNK2Q9HBH9 465 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
PRPF18-202ENST00000378572 FCER1AP12319 257 aa16.34■□□□□ 0.21
PRPF18-202ENST00000378572 CYBAP13498 195 aa16.34■□□□□ 0.21
PRPF18-202ENST00000378572 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
PRPF18-202ENST00000378572 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
PRPF18-202ENST00000378572 TRPV1Q8NER1 839 aa16.34■□□□□ 0.21
PRPF18-202ENST00000378572 MMP19Q99542 508 aa16.34■□□□□ 0.21
PRPF18-202ENST00000378572 DNM1LO00429 736 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 TDO2P48775 406 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 SIAH1Q8IUQ4 282 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.21
PRPF18-202ENST00000378572 COBLO75128 1261 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 CDC45O75419 566 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 SLC25A27O95847 323 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 APPP05067 770 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 TMEM132BQ14DG7 1078 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 ARRDC4Q8NCT1 418 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
PRPF18-202ENST00000378572 CTDP1Q9Y5B0 961 aaPredicted RBP16.33■□□□□ 0.2
PRPF18-202ENST00000378572 RLFQ13129 1914 aa16.33■□□□□ 0.2
PRPF18-202ENST00000378572 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
PRPF18-202ENST00000378572 KCTD2Q14681 263 aa16.32■□□□□ 0.2
PRPF18-202ENST00000378572 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
PRPF18-202ENST00000378572 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
PRPF18-202ENST00000378572 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
PRPF18-202ENST00000378572 SEPT4O43236 478 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
PRPF18-202ENST00000378572 RTP1P59025 263 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 APPBP2Q92624 585 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 MAML3Q96JK9 1138 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
PRPF18-202ENST00000378572 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
PRPF18-202ENST00000378572 PARP14Q460N5 1801 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 PGK2P07205 417 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 DEFB123Q8N688 67 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
PRPF18-202ENST00000378572 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
PRPF18-202ENST00000378572 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
PRPF18-202ENST00000378572 GPAA1O43292 621 aa16.3■□□□□ 0.2
PRPF18-202ENST00000378572 STAT3P40763 770 aa16.3■□□□□ 0.2
PRPF18-202ENST00000378572 LRRFIP1Q32MZ4 808 aaKnown RBP16.3■□□□□ 0.2
PRPF18-202ENST00000378572 Q7L0L9 218 aa16.3■□□□□ 0.2
PRPF18-202ENST00000378572 VWA5AO00534 786 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
PRPF18-202ENST00000378572 RASA1P20936 1047 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 COPB2P35606 906 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 LRIT3Q3SXY7 679 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 OSBP2Q969R2 916 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 SLF1Q9BQI6 1058 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 ZNF287Q9HBT7 754 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
PRPF18-202ENST00000378572 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 PRDM1O75626 825 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 RARBP10826 455 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms