RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PDE8BO95263 885 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 TADA2BQ86TJ2 420 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 ANKRD20A12PQ8NF67 263 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 HELBQ8NG08 1087 aaPredicted RBP18.57■□□□□ 0.56
TRIM39-201ENST00000376656 OR8K1Q8NGG5 319 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 PHF20Q9BVI0 1012 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 SELENOOQ9BVL4 669 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 TIAM2Q8IVF5 1701 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 TARSL2A2RTX5 802 aaKnown RBP18.57■□□□□ 0.56
TRIM39-201ENST00000376656 ZNF185O15231 689 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 TRIM28Q13263 835 aaKnown RBP18.57■□□□□ 0.56
TRIM39-201ENST00000376656 WDR59Q6PJI9 974 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 GDAQ9Y2T3 454 aa18.57■□□□□ 0.56
TRIM39-201ENST00000376656 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 CPP00450 1065 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 GPTP24298 496 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 GUCY2CP25092 1073 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 LCORLQ8N3X6 602 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 JAKMIP2Q96AA8 810 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 RNF26Q9BY78 433 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-201ENST00000376656 GNL3LQ9NVN8 582 aaKnown RBP18.56■□□□□ 0.56
TRIM39-201ENST00000376656 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-201ENST00000376656 SHOX2O60902 331 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-201ENST00000376656 PTGDRQ13258 359 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 IRF2BP1Q8IU81 584 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 MICALL1Q8N3F8 863 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 ANKRD18BA2A2Z9 1011 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 PDXDC2PQ6P474 469 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 CCNI2Q6ZMN8 369 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-201ENST00000376656 EHD4Q9H223 541 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 SLC4A4Q9Y6R1 1079 aa18.56■□□□□ 0.56
TRIM39-201ENST00000376656 TRIM49BA6NDI0 452 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 CCT5P48643 541 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 FAM76AQ8TAV0 307 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 YY1AP1Q9H869 796 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 BRMS1Q9HCU9 246 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 LUC7L2Q9Y383 392 aaKnown RBP18.55■□□□□ 0.56
TRIM39-201ENST00000376656 MYH13Q9UKX3 1938 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 A0A087WUV0 522 aaPredicted RBP18.55■□□□□ 0.56
TRIM39-201ENST00000376656 RCCD1A6NED2 376 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 EXOC5O00471 708 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
TRIM39-201ENST00000376656 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 TTC38Q5R3I4 469 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 TMTC2Q8N394 836 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 MB21D1Q8N884 522 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 CAGE1Q8TC20 777 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 DNAJC7Q99615 494 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 LACRTQ9GZZ8 138 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 RABEP2Q9H5N1 569 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 SPATA31A3Q5VYP0 1347 aa18.55■□□□□ 0.56
TRIM39-201ENST00000376656 SNAP23O00161 211 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
TRIM39-201ENST00000376656 XBP1P17861 261 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 PRCPP42785 496 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 C2orf54Q08AI8 447 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 SMIM22K7EJ46 135 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
TRIM39-201ENST00000376656 CKAP4Q07065 602 aaKnown RBP18.54■□□□□ 0.56
TRIM39-201ENST00000376656 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 ZNF658Q5TYW1 1059 aaPredicted RBP18.54■□□□□ 0.56
TRIM39-201ENST00000376656 KIAA1328Q86T90 577 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 V9GY48 417 aaPredicted RBP18.54■□□□□ 0.56
TRIM39-201ENST00000376656 GOLGA6CA6NDK9 693 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 GOLGA6DP0CG33 693 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 IRAK1P51617 712 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 GOLGA6AQ9NYA3 693 aa18.54■□□□□ 0.56
TRIM39-201ENST00000376656 TNKSO95271 1327 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 PLEKHA8P1O95397 391 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 EIF5P55010 431 aaKnown RBP18.53■□□□□ 0.56
TRIM39-201ENST00000376656 CTSWP56202 376 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
TRIM39-201ENST00000376656 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 C1orf167Q5SNV9 1468 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 IL17AQ16552 155 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
TRIM39-201ENST00000376656 GOLGA6BA6NDN3 693 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 BMP15O95972 392 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 RPN1P04843 607 aaKnown RBP18.52■□□□□ 0.56
TRIM39-201ENST00000376656 LIG3P49916 1009 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 FUT2Q10981 343 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 SEC23AQ15436 765 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 TNFRSF25Q93038 417 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 NACAP1Q9BZK3 213 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 RCAN1P53805 252 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
TRIM39-201ENST00000376656 NPY5RQ15761 445 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 HLFQ16534 295 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 KAT2BQ92831 832 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 TNS3Q68CZ2 1445 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 ADAMTSL3P82987 1691 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms