RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CGNQ9P2M7 1197 aaKnown RBP13.91□□□□□ -0.18
UBR4-203ENST00000375225 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
UBR4-203ENST00000375225 RIMBP2O15034 1052 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 ACTN4O43707 911 aaKnown RBP13.9□□□□□ -0.18
UBR4-203ENST00000375225 TGFB2P61812 414 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 SEMA3FQ13275 785 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
UBR4-203ENST00000375225 FILIP1LQ4L180 1135 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 ARL6IP4Q66PJ3 421 aaKnown RBP13.9□□□□□ -0.18
UBR4-203ENST00000375225 IQUBQ8NA54 791 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 RMND1Q9NWS8 449 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
UBR4-203ENST00000375225 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
UBR4-203ENST00000375225 PRDM1O75626 825 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 PLEKHA8P1O95397 391 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 PRDX5P30044 214 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 ATP2C1P98194 919 aaPredicted RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 OXER1Q8TDS5 423 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 ANKRD7Q92527 254 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 FANCLQ9NW38 375 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.19
UBR4-203ENST00000375225 JAG2Q9Y219 1238 aa13.9□□□□□ -0.19
UBR4-203ENST00000375225 FAM205AQ6ZU69 1335 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 UBE2Q2LH0YL09 131 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 TPM1P09493 284 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 PPP4CP60510 307 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 ARMCX5Q6P1M9 558 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 UBE2Q2Q8WVN8 375 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 DHX58Q96C10 678 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
UBR4-203ENST00000375225 CYP2D7A0A087X1C5 515 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 DPEP1P16444 411 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 LONP1P36776 959 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 SPAG1Q07617 926 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SPATA1Q5VX52 437 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SPECC1LQ69YQ0 1117 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 RTKN2Q8IZC4 609 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 C7orf43Q8WVR3 580 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SYMPKQ92797 1274 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 PPP1R13BQ96KQ4 1090 aa13.88□□□□□ -0.19
UBR4-203ENST00000375225 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 GTPBP4Q9BZE4 634 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
UBR4-203ENST00000375225 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 LAD1O00515 517 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 C21orf2O43822 256 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
UBR4-203ENST00000375225 TSPY3P0CV98 308 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 TSPY8P0CW00 308 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 ATP1A3P13637 1013 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 TFAP4Q01664 338 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 GRM4Q14833 912 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 PODNQ7Z5L7 613 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 SH3RF1Q7Z6J0 888 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 FOXP4Q8IVH2 680 aaPredicted RBP13.87□□□□□ -0.19
UBR4-203ENST00000375225 BLIDQ8IZY5 108 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 PDILTQ8N807 584 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 TNFRSF25Q93038 417 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 FEZ1Q99689 392 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
UBR4-203ENST00000375225 SUGT1Q9Y2Z0 365 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
UBR4-203ENST00000375225 CCDC194A0A1B0GVG4 234 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 STX10O60499 249 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 MYL1P05976 194 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 ZNF18P17022 549 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 GTF2IP78347 998 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 PTGDRQ13258 359 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 ZNF174Q15697 407 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 PAGE5Q96GU1 130 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 HSD3B7Q9H2F3 369 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 PIM2Q9P1W9 311 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 PCDHA4Q9UN74 947 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
UBR4-203ENST00000375225 BRCA1P38398 1863 aaKnown RBP13.86□□□□□ -0.19
UBR4-203ENST00000375225 SNED1Q8TER0 1413 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
UBR4-203ENST00000375225 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms