RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 KRT31Q15323 416 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 E2F5Q15329 346 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 CCT8L2Q96SF2 557 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 KRT14P02533 472 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 CABP4P57796 275 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 ALS2CLQ60I27 953 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 MAP3K15Q6ZN16 1313 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 PTPREP23469 700 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 IRX1P78414 480 aaPredicted RBP23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 APBA1Q02410 837 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 CYB5D1Q6P9G0 228 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 CCDC114Q96M63 670 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 SCLT1Q96NL6 688 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 ZIM3Q96PE6 472 aa23.04■■□□□ 1.28
TMEFF1-201ENST00000374879 A0A1B0GUA9 196 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 SKAP2O75563 359 aaPredicted RBP23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 AFMP43652 599 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 CCDC70Q6NSX1 233 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 TLDC1Q6P9B6 456 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 LMBR1LQ6UX01 489 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 NEUROD6Q96NK8 337 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 JADE2Q9NQC1 790 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 SEMA3EO15041 775 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 ATF3P18847 181 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 SARNPP82979 210 aaKnown RBP23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 PTGISQ16647 500 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 MYCBPAPQ8TBZ2 947 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 C4AP0C0L4 1744 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 C4BP0C0L5 1744 aa23.03■■□□□ 1.28
TMEFF1-201ENST00000374879 FOXP2O15409 715 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 RNF113AO15541 343 aaKnown RBP23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 IMMTQ16891 758 aaKnown RBP23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 KDM7AQ6ZMT4 941 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 NLRP14Q86W24 1093 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 FUKQ8N0W3 1084 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 PLBD2Q8NHP8 589 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 OSBP2Q969R2 916 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 ADAMTSL3P82987 1691 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 PPP1R3GB7ZBB8 358 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 EZRP15311 586 aaKnown RBP23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 CASP7P55210 303 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 PPARAQ07869 468 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 KANK3Q6NY19 840 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 TAB2Q9NYJ8 693 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 TPX2Q9ULW0 747 aaKnown RBP23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 ARFGEF2Q9Y6D5 1785 aa23.02■■□□□ 1.28
TMEFF1-201ENST00000374879 PPP1R37O75864 691 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 RPSAP08865 295 aaKnown RBP23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 METAP2P50579 478 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 DPYDQ12882 1025 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 C6orf89Q6UWU4 347 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 RBM28Q9NW13 759 aaKnown RBP23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 FGAP02671 866 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 TRIM29Q14134 588 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 NAA25Q14CX7 972 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 MMGT1Q8N4V1 131 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 NCOA7Q8NI08 942 aa23.01■■□□□ 1.27
TMEFF1-201ENST00000374879 RCCD1A6NED2 376 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 IDEP14735 1019 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 EPHB4P54760 987 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 SPRED3Q2MJR0 410 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 RALYLQ86SE5 291 aaKnown RBP23■■□□□ 1.27
TMEFF1-201ENST00000374879 LACRTQ9GZZ8 138 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.27
TMEFF1-201ENST00000374879 GRIK3Q13003 919 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 NBPF20Q3BBV1 942 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 IQCEQ6IPM2 695 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 HAUS2Q9NVX0 235 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 DENND2AQ9ULE3 1009 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 CTNND2Q9UQB3 1225 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 DUSP10Q9Y6W6 482 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 COL18A1P39060 1754 aa23■■□□□ 1.27
TMEFF1-201ENST00000374879 BTBD18B2RXH4 712 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 PPP1R12BO60237 982 aaPredicted RBP22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 COPB1P53618 953 aaKnown RBP22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 KIAA1328Q86T90 577 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 LIMA1Q9UHB6 759 aaKnown RBP22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 IRF6O14896 467 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 TIMM10P62072 90 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 TRIM14Q14142 442 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 CREG2Q8IUH2 290 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 NOSTRINQ8IVI9 506 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
TMEFF1-201ENST00000374879 TTC26A0AVF1 554 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 LRRC10BA6NIK2 292 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 DNM1LO00429 736 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 NKX2-3Q8TAU0 364 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 CSRNP2Q9H175 543 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 ATP6V0A4Q9HBG4 840 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 A0A087X0B3 334 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 CDKL5O76039 1030 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 FOXO4P98177 505 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 DRP2Q13474 957 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 EMBQ6PCB8 327 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 CCDC121Q6ZUS5 278 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 MAGEC3Q8TD91 643 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 ZNF483Q8TF39 744 aaPredicted RBP22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 GGA2Q9UJY4 613 aa22.98■■□□□ 1.27
TMEFF1-201ENST00000374879 GOLGA6L7A0A1B0GV03 622 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms