RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PPP1R9AQ9ULJ8 1098 aa22.48■■□□□ 1.19
TMEM53-201ENST00000372235 SMIM22K7EJ46 135 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 TTLL1O95922 423 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 TSPY3P0CV98 308 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 TSPY8P0CW00 308 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 FCER1AP12319 257 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 ADORA2AP29274 412 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
TMEM53-201ENST00000372235 C11orf49Q9H6J7 331 aa22.47■■□□□ 1.19
TMEM53-201ENST00000372235 A0A0G2JMZ2 1700 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 F5H6K3 240 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 KLRC3Q07444 240 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 PPARAQ07869 468 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 CCL14Q16627 93 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 SMC5Q8IY18 1101 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 PRPF38AQ8NAV1 312 aaKnown RBP22.46■■□□□ 1.19
TMEM53-201ENST00000372235 CLIP2Q9UDT6 1046 aa22.46■■□□□ 1.19
TMEM53-201ENST00000372235 ZNF236Q9UL36 1845 aa22.45■■□□□ 1.19
TMEM53-201ENST00000372235 VWA5AO00534 786 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 FAM83BQ5T0W9 1011 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 RIOX2Q8IUF8 465 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 STK11IPQ8N1F8 1099 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 NEDD1Q8NHV4 660 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 SEC62Q99442 399 aaKnown RBP22.45■■□□□ 1.18
TMEM53-201ENST00000372235 SLF1Q9BQI6 1058 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 MTMR4Q9NYA4 1195 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 CTDP1Q9Y5B0 961 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-201ENST00000372235 PLIN4Q96Q06 1357 aa22.45■■□□□ 1.18
TMEM53-201ENST00000372235 IGKV6D-41A0A0C4DH26 115 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 FDX1P10109 184 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 STAT3P40763 770 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 MFAP1P55081 439 aaKnown RBP22.44■■□□□ 1.18
TMEM53-201ENST00000372235 KCTD2Q14681 263 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 TMEM132BQ14DG7 1078 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 SAMD1Q6SPF0 538 aaPredicted RBP22.44■■□□□ 1.18
TMEM53-201ENST00000372235 GMCL1P1Q8NEA9 526 aa22.44■■□□□ 1.18
TMEM53-201ENST00000372235 GREB1LQ9C091 1923 aaPredicted RBP22.44■■□□□ 1.18
TMEM53-201ENST00000372235 PRDM1O75626 825 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 CCND3P30281 292 aaPredicted RBP22.43■■□□□ 1.18
TMEM53-201ENST00000372235 MCMDC2Q4G0Z9 681 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 NPLOC4Q8TAT6 608 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 CEP95Q96GE4 821 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 MMP19Q99542 508 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
TMEM53-201ENST00000372235 NRBP1Q9UHY1 535 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 FEM1BQ9UK73 627 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 DIS3Q9Y2L1 958 aaKnown RBP22.43■■□□□ 1.18
TMEM53-201ENST00000372235 RLFQ13129 1914 aa22.43■■□□□ 1.18
TMEM53-201ENST00000372235 TRIM6-TRIM34B2RNG4 842 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 ZBED4O75132 1171 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 NDUFB10O96000 172 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 TFAP4Q01664 338 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 ALX1Q15699 326 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 LHX8Q68G74 356 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 TEX13BQ9BXU2 312 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 LNPKQ9C0E8 428 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 PCDH10Q9P2E7 1040 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 ANAPC4Q9UJX5 808 aa22.42■■□□□ 1.18
TMEM53-201ENST00000372235 COLQQ9Y215 455 aaPredicted RBP22.42■■□□□ 1.18
TMEM53-201ENST00000372235 ATP2A1O14983 1001 aa22.41■■□□□ 1.18
TMEM53-201ENST00000372235 CNGA1P29973 690 aa22.41■■□□□ 1.18
TMEM53-201ENST00000372235 CHD1LQ86WJ1 897 aa22.41■■□□□ 1.18
TMEM53-201ENST00000372235 FLRT1Q9NZU1 646 aa22.41■■□□□ 1.18
TMEM53-201ENST00000372235 TSPY2A6NKD2 308 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 IGHA2P01877 340 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 NT5C2P49902 561 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 OAZ1P54368 228 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 DIS3LQ8TF46 1054 aaKnown RBP22.4■■□□□ 1.18
TMEM53-201ENST00000372235 OSBPL3Q9H4L5 887 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 FBXO28Q9NVF7 368 aa22.4■■□□□ 1.18
TMEM53-201ENST00000372235 ZNF214Q9UL59 606 aaPredicted RBP22.4■■□□□ 1.18
TMEM53-201ENST00000372235 ZMYM6O95789 1325 aa22.39■■□□□ 1.18
TMEM53-201ENST00000372235 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 HIP1O00291 1037 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 PCP11498 1178 aaKnown RBP22.39■■□□□ 1.17
TMEM53-201ENST00000372235 CYBAP13498 195 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 CYP2C19P33261 490 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 NUCB1Q02818 461 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 CHRDL2Q6WN34 429 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 MSL3Q8N5Y2 521 aaKnown RBP22.39■■□□□ 1.17
TMEM53-201ENST00000372235 ARRDC4Q8NCT1 418 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 CHURC1Q8WUH1 139 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 FBXO40Q9UH90 709 aa22.39■■□□□ 1.17
TMEM53-201ENST00000372235 PARP14Q460N5 1801 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 SEPT4O43236 478 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 COBLO75128 1261 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 BMP3P12645 472 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 SLFN13Q68D06 897 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 FAM160B2Q86V87 743 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 REPS2Q8NFH8 660 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 RILPL2Q969X0 211 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 GMCL1Q96IK5 515 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 MAML3Q96JK9 1138 aa22.38■■□□□ 1.17
TMEM53-201ENST00000372235 DNM1LO00429 736 aa22.37■■□□□ 1.17
TMEM53-201ENST00000372235 COL6A1P12109 1028 aa22.37■■□□□ 1.17
TMEM53-201ENST00000372235 MNX1P50219 401 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-201ENST00000372235 FAM47AQ5JRC9 791 aa22.37■■□□□ 1.17
TMEM53-201ENST00000372235 B4GALNT3Q6L9W6 998 aa22.37■■□□□ 1.17
TMEM53-201ENST00000372235 CCDC129Q6ZRS4 1044 aa22.37■■□□□ 1.17
TMEM53-201ENST00000372235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms