RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 DBNLQ9UJU6 430 aaKnown RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 LEKR1Q6ZMV7 388 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 NELFCDQ8IXH7 590 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 INTS4Q96HW7 963 aaKnown RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 DNAJC25Q9H1X3 360 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 BCCIPQ9P287 314 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 MYL3P08590 195 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SCG2P13521 617 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 MIS18BP1Q6P0N0 1132 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 JPH2Q9BR39 696 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SLC16A10Q8TF71 515 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 CD209Q9NNX6 404 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 MINPP1Q9UNW1 487 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SLC15A2Q16348 729 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 NEK8Q86SG6 692 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 FTOQ9C0B1 505 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTPRK-205ENST00000368213 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 TNNC2P02585 160 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 YWHAEP62258 255 aaKnown RBP11.97□□□□□ -0.49
PTPRK-205ENST00000368213 INF2Q27J81 1249 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 NUB1Q9Y5A7 615 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 GOLGA6L7A0A1B0GV03 622 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
PTPRK-205ENST00000368213 CUTAO60888 179 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 GPSM2P81274 684 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 KIAA1841Q6NSI8 718 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
PTPRK-205ENST00000368213 AGTPBP1Q9UPW5 1226 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 SYT1P21579 422 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 ZNF157P51786 506 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-205ENST00000368213 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 SNX21Q969T3 373 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 RASAL2Q9UJF2 1139 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
PTPRK-205ENST00000368213 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 ADCY5O95622 1261 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 STAMBPO95630 424 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 GH2P01242 217 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 FERP16591 822 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
PTPRK-205ENST00000368213 GALNT17Q6IS24 598 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 RAET1EQ8TD07 263 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.49
PTPRK-205ENST00000368213 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 LCORLQ8N3X6 602 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 PPP1R14CQ8TAE6 165 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 MMS19Q96T76 1030 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 TACC1O75410 805 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
PTPRK-205ENST00000368213 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 SREK1Q8WXA9 508 aaKnown RBP11.96□□□□□ -0.49
PTPRK-205ENST00000368213 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 ZNF577Q9BSK1 485 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
PTPRK-205ENST00000368213 ADD2P35612 726 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 TECP42680 631 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 IFRD2Q12894 506 aaPredicted RBP11.96□□□□□ -0.5
PTPRK-205ENST00000368213 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 TMEM179Q6ZVK1 233 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.5
PTPRK-205ENST00000368213 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.5
PTPRK-205ENST00000368213 PARP2Q9UGN5 583 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 K7ENM7 598 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.5
PTPRK-205ENST00000368213 RASGRF1Q13972 1273 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 PI16Q6UXB8 463 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 RDH13Q8NBN7 331 aa11.96□□□□□ -0.5
PTPRK-205ENST00000368213 KRT83P78385 493 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 LRCH2Q5VUJ6 765 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 CSGALNACT2Q8N6G5 542 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 ELMSAN1Q6PJG2 1045 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
PTPRK-205ENST00000368213 H7C1W4 665 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 ATP2A1O14983 1001 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
PTPRK-205ENST00000368213 XPOTO43592 962 aaKnown RBP11.95□□□□□ -0.5
PTPRK-205ENST00000368213 PRKAB2O43741 272 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
PTPRK-205ENST00000368213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTPRK-205ENST00000368213 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms