RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 GMCL1P1Q8NEA9 526 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 VAT1LQ9HCJ6 419 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 NMRK2Q9NPI5 230 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 ZNF112Q9UJU3 913 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 CSADQ9Y600 493 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 MYH4Q9Y623 1939 aa19.24■□□□□ 0.67
SDCBP2-202ENST00000360779 A0A1W2PRG0 241 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 XBP1P17861 261 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 LDHDQ86WU2 507 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 TNPO1Q92973 898 aaKnown RBP19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 MTMR6Q9Y217 621 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 TMX2Q9Y320 296 aa19.23■□□□□ 0.67
SDCBP2-202ENST00000360779 ATAD5Q96QE3 1844 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 USP2O75604 605 aaPredicted RBP19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 NDUFB10O96000 172 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 FOXD4L6Q3SYB3 417 aaPredicted RBP19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 FOXD4L3Q6VB84 417 aaPredicted RBP19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 HOMER1Q86YM7 354 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 AIFM3Q96NN9 605 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 CPVLQ9H3G5 476 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 SYNPO2Q9UMS6 1093 aa19.22■□□□□ 0.67
SDCBP2-202ENST00000360779 F13A1P00488 732 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 SNHG28P0DPA3 235 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 BMP3P12645 472 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 OTUD7BQ6GQQ9 843 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 ARMC9Q7Z3E5 817 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 NUP88Q99567 741 aaPredicted RBP19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
SDCBP2-202ENST00000360779 DOCK1Q14185 1865 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 UBE2Q2LH0YL09 131 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 FUT2Q10981 343 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 GMCL1Q96IK5 515 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 SPZ1Q9BXG8 430 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 ATP6V1DQ9Y5K8 247 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 POLR2AP24928 1970 aaKnown RBP19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 UTRNP46939 3433 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 PTPRAP18433 802 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 SLC16A2P36021 539 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 SAFBQ15424 915 aaKnown RBP eCLIP19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 ZHX2Q9Y6X8 837 aa19.2■□□□□ 0.66
SDCBP2-202ENST00000360779 USP17L10C9JJH3 530 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 TMEM232C9JQI7 657 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 TRAF5O00463 557 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 SCG2P13521 617 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 USP14P54578 494 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 NOL9Q5SY16 702 aaKnown RBP19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 FAM83BQ5T0W9 1011 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 KRT40Q6A162 431 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 GJB4Q9NTQ9 266 aa19.19■□□□□ 0.66
SDCBP2-202ENST00000360779 TRIM75PA6NK02 468 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 SMARCA1P28370 1054 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 SPP2Q13103 211 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 MTMR2Q13614 643 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 VGLL4Q14135 290 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 PFKFB3Q16875 520 aaPredicted RBP19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 ZNF280CQ8ND82 737 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 FBXO18Q8NFZ0 1043 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 PIGSQ96S52 555 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 ELP3Q9H9T3 547 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 VPS54Q9P1Q0 977 aa19.18■□□□□ 0.66
SDCBP2-202ENST00000360779 CYTH3O43739 400 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 PKN1Q16512 942 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 MOB2Q70IA6 237 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 ANKRD13AQ8IZ07 590 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 ADGRF4Q8IZF3 695 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 BRMS1Q9HCU9 246 aa19.17■□□□□ 0.66
SDCBP2-202ENST00000360779 SYDE2Q5VT97 1194 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 WDR18Q9BV38 432 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 KIAA1683Q9H0B3 1180 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 ZSCAN16Q9H4T2 348 aaPredicted RBP19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 RIOX1Q9H6W3 641 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 KCNJ14Q9UNX9 436 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
SDCBP2-202ENST00000360779 GOLGA6L22H0YM25 854 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 STAT2P52630 851 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 NLRP5P59047 1200 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 TANGO6Q9C0B7 1094 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 TMOD4Q9NZQ9 345 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 WDR46O15213 610 aaKnown RBP19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 SLC35G1Q2M3R5 365 aa19.15■□□□□ 0.66
SDCBP2-202ENST00000360779 KIAA1755Q5JYT7 1200 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms