RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ATP6V1G3Q96LB4 118 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 INTS9Q9NV88 658 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 CHPF2Q9P2E5 772 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ABCF2Q9UG63 623 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ZFYVE9O95405 1425 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 A0A087WWV3 80 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 MFAP3LO75121 409 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 LAMB3Q13751 1172 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 MRRFQ96E11 262 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 BLZF1Q9H2G9 400 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 SLC8A3P57103 927 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 KLHL30Q0D2K2 578 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 TNIP1Q15025 636 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 TTC38Q5R3I4 469 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 RASGRF2O14827 1237 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 IFNAR2P48551 515 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 NCAPH2Q6IBW4 605 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 GDAP1Q8TB36 358 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 KDM5DQ9BY66 1539 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EIF4E1BA6NMX2 242 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 MEFVO15553 781 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 TXNDC2Q86VQ3 553 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 RUBCNQ92622 972 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 FERMT2Q96AC1 680 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 BATF3Q9NR55 127 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 RAD23BP54727 409 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 NYAP1Q6ZVC0 841 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EPB41L5Q9HCM4 733 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EPB41P11171 864 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 CCZ1BP86790 482 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 CCZ1P86791 482 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EPN3Q9H201 632 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 SERPINB6P35237 376 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 ESR2Q92731 530 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 USP6NLQ92738 828 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 BPIFA3Q9BQP9 254 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 C19orf44Q9H6X5 657 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TATP17735 454 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 COPB1P53618 953 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PTH1RQ03431 593 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 RBL2Q08999 1139 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 CXorf38Q8TB03 319 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 NFU1Q9UMS0 254 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 STXBP3O00186 592 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TBC1D8O95759 1140 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 ATP1A3P13637 1013 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 NDUFA8P51970 172 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 CUL1Q13616 776 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 HEATR3Q7Z4Q2 680 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 GSPT2Q8IYD1 628 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 THAP12O43422 761 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PDE6BP35913 854 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 MSH2P43246 934 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SPECC1L-ADORA2AF8WAN1 911 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 RPL13P26373 211 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 STRN3Q13033 797 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SDCCAG8Q86SQ7 713 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PACS2Q86VP3 889 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 ZBTB10Q96DT7 871 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 EIF2AK4Q9P2K8 1649 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TRMT2AQ8IZ69 625 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 CCDC68Q9H2F9 335 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SHANK1Q9Y566 2161 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 RXRAP19793 462 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 INF2Q27J81 1249 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SERTAD1Q9UHV2 236 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 GTPBP6O43824 516 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SNUPNO95149 360 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 KRT15P19012 456 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 EIF4A3P38919 411 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TNNI2P48788 182 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 CCDC93Q567U6 631 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 KRT79Q5XKE5 535 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SV2BQ7L1I2 683 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 U2AF1L4Q8WU68 220 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 DRC3Q9H069 523 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PAX7P23759 505 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 GNAQP50148 359 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 GRAMD4Q6IC98 578 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TEX9Q8N6V9 391 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PAF1Q8N7H5 531 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 HELLSQ9NRZ9 838 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 ANGEL1Q9UNK9 670 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 TRIM37O94972 964 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 ANXA1P04083 346 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 KCNJ6P48051 423 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 CABP5Q9NP86 173 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 MAPK8IP1Q9UQF2 711 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-203ENST00000358544 SPAG7O75391 227 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PRR16Q569H4 304 aa6.67□□□□□ -1.34
VPS13B-203ENST00000358544 PASKQ96RG2 1323 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 H3BQF6 201 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 H2AFXP16104 143 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PSMD7P51665 324 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms