RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PHACTR2O75167 634 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 GYG1P46976 350 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 KCNK18Q7Z418 384 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 CCDC84Q86UT8 332 aaPredicted RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 STAG2Q8N3U4 1231 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 SPATA18Q8TC71 538 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 ABCA4P78363 2273 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 CTIFO43310 598 aaKnown RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 FUT2Q10981 343 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 TESPA1A2RU30 521 aaPredicted RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 C21orf2O43822 256 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 RASGRF1Q13972 1273 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 ANKRD13DQ6ZTN6 518 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 MICU3Q86XE3 530 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 ZIC5Q96T25 663 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 DDX21Q9NR30 783 aaKnown RBP eCLIP6.6□□□□□ -1.35
CD47-201ENST00000355354 VIL1P09327 827 aaKnown RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 MCCP23508 829 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 RBM43Q6ZSC3 357 aaKnown RBP6.6□□□□□ -1.35
CD47-201ENST00000355354 KIRREL3Q8IZU9 778 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 ZSWIM2Q8NEG5 633 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 MYRIPQ8NFW9 859 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 TMEM60Q9H2L4 133 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 ZNF318Q5VUA4 2279 aa6.6□□□□□ -1.35
CD47-201ENST00000355354 PITPNM2Q9BZ72 1349 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 MYH9P35579 1960 aaKnown RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 LGR5O75473 907 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 GORABQ5T7V8 394 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 TTC19Q6DKK2 380 aaPredicted RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 RCSD1Q6JBY9 416 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 USP50Q70EL3 339 aaPredicted RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 CELF1Q92879 486 aaKnown RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 MYO10Q9HD67 2058 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 SPTBN4Q9H254 2564 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 TANC1Q9C0D5 1861 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 POLLQ9UGP5 575 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 MYH4Q9Y623 1939 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 KCNA1Q09470 495 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 PKN1Q16512 942 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 KSR2Q6VAB6 950 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 LRRC8AQ8IWT6 810 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 LCORLQ8N3X6 602 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 SONP18583 2426 aaKnown RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 DIXDC1Q155Q3 683 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 ANKRD13CQ8N6S4 541 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 ZC3H15Q8WU90 426 aaKnown RBP6.59□□□□□ -1.35
CD47-201ENST00000355354 IFNKQ9P0W0 207 aa6.59□□□□□ -1.35
CD47-201ENST00000355354 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 VWA3AA6NCI4 1184 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 DCDC2CA8MYV0 355 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 CD1EP15812 388 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 RPS6KB1P23443 525 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 MOGSQ13724 837 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 ECM1Q16610 540 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 RABL6Q3YEC7 729 aaPredicted RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 DAB2IPQ5VWQ8 1189 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 SYT10Q6XYQ8 523 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 AGXT2Q9BYV1 514 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 RIPOR2Q9Y4F9 1068 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 CSF1RP07333 972 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 SLC9C2Q5TAH2 1124 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 CGNQ9P2M7 1197 aaKnown RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 DMGDHQ9UI17 866 aaKnown RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 AJAP1Q9UKB5 411 aaPredicted RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 GDAQ9Y2T3 454 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 DOCK5Q9H7D0 1870 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 TRIOBPQ9H2D6 2365 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 LINC00301Q8NCQ3 95 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 API5Q9BZZ5 524 aaKnown RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 PDRG1Q9NUG6 133 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 C9orf78Q9NZ63 289 aaPredicted RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 NCOR2Q9Y618 2525 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
CD47-201ENST00000355354 ARHGAP27Q6ZUM4 889 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 ZDHHC14Q8IZN3 488 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 SHKBP1Q8TBC3 707 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 CNKSR1Q969H4 720 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 MAP3K14Q99558 947 aa6.58□□□□□ -1.36
CD47-201ENST00000355354 DOCK8Q8NF50 2099 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms