RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 PPP4R3BQ5MIZ7 849 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 MORN1Q5T089 497 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 LRRC47Q8N1G4 583 aaKnown RBP23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 NUP88Q99567 741 aaPredicted RBP23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 MOV10L1Q9BXT6 1211 aaKnown RBP23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 SPATC1LQ9H0A9 340 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 TOMM22Q9NS69 142 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 FBXO28Q9NVF7 368 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 PARP14Q460N5 1801 aa23.96■■□□□ 1.43
HCFC1R1-202ENST00000354679 RGS2P41220 211 aa23.95■■□□□ 1.42
HCFC1R1-202ENST00000354679 USP6NLQ92738 828 aa23.95■■□□□ 1.42
HCFC1R1-202ENST00000354679 RNF208Q9H0X6 261 aa23.95■■□□□ 1.42
HCFC1R1-202ENST00000354679 PPP1R9AQ9ULJ8 1098 aa23.95■■□□□ 1.42
HCFC1R1-202ENST00000354679 HMGCRP04035 888 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 PLS1Q14651 629 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 RRP12Q5JTH9 1297 aaKnown RBP23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 GMCL1P1Q8NEA9 526 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 DSCC1Q9BVC3 393 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 NBPF3Q9H094 633 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 UNC93B1Q9H1C4 597 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 ADAMTS5Q9UNA0 930 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 STX8Q9UNK0 236 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 IVNS1ABPQ9Y6Y0 642 aa23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 MKI67P46013 3256 aaKnown RBP23.94■■□□□ 1.42
HCFC1R1-202ENST00000354679 SLC15A5A6NIM6 579 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 NMT2O60551 498 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 XRCC5P13010 732 aaKnown RBP23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 PTPREP23469 700 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 AKNAD1Q5T1N1 836 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 CENPQQ7L2Z9 268 aaPredicted RBP23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 TBC1D10CQ8IV04 446 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 SHCBP1Q8NEM2 672 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 TRIB2Q92519 343 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 SLF1Q9BQI6 1058 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 IL17RBQ9NRM6 502 aa23.93■■□□□ 1.42
HCFC1R1-202ENST00000354679 RAD50Q92878 1312 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 VWA5AO00534 786 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 PCP11498 1178 aaKnown RBP23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 ERCC3P19447 782 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 MAP2K5Q13163 448 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 TMEM132BQ14DG7 1078 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 SLFN13Q68D06 897 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 MFSD6Q6ZSS7 791 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 STAG1Q8WVM7 1258 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 APBA2Q99767 749 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 IL25Q9H293 177 aa23.92■■□□□ 1.42
HCFC1R1-202ENST00000354679 ZNF213O14771 459 aa23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 GJB1P08034 283 aa23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 GRB14Q14449 540 aa23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 TRMT44Q8IYL2 757 aaKnown RBP23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 NKX2-3Q8TAU0 364 aa23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 RNF41Q9H4P4 317 aaPredicted RBP23.91■■□□□ 1.42
HCFC1R1-202ENST00000354679 PDE4DIPQ5VU43 2346 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 ZKSCAN1P17029 563 aaPredicted RBP23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 CHMLP26374 656 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 TRIM32Q13049 653 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 NCAPG2Q86XI2 1143 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 RUFY2Q8WXA3 655 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 MROH8Q9H579 483 aa23.9■■□□□ 1.42
HCFC1R1-202ENST00000354679 LAMA4Q16363 1823 aa23.89■■□□□ 1.42
HCFC1R1-202ENST00000354679 SLC25A27O95847 323 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 BMP3P12645 472 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 GJA8P48165 433 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 NOVP48745 357 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 PRPF38AQ8NAV1 312 aaKnown RBP23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 REPS2Q8NFH8 660 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 SHISA4Q96DD7 197 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 TCP11L1Q9NUJ3 509 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 CTNNA3Q9UI47 895 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 FEM1BQ9UK73 627 aa23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 COL11A1P12107 1806 aaPredicted RBP23.89■■□□□ 1.41
HCFC1R1-202ENST00000354679 NEDD4P46934 1319 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 STRNO43815 780 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 STAT3P40763 770 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 CCL14Q16627 93 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 RIOX2Q8IUF8 465 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 U2AF1L4Q8WU68 220 aaKnown RBP23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 GMCL1Q96IK5 515 aa23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 PAK6Q9NQU5 681 aaPredicted RBP23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 ZNF214Q9UL59 606 aaPredicted RBP23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
HCFC1R1-202ENST00000354679 HOXC6P09630 235 aa23.87■■□□□ 1.41
HCFC1R1-202ENST00000354679 SLC1A4P43007 532 aa23.87■■□□□ 1.41
HCFC1R1-202ENST00000354679 IMMTQ16891 758 aaKnown RBP23.87■■□□□ 1.41
HCFC1R1-202ENST00000354679 KIFC2Q96AC6 838 aa23.87■■□□□ 1.41
HCFC1R1-202ENST00000354679 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.87■■□□□ 1.41
HCFC1R1-202ENST00000354679 RPTORQ8N122 1335 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 TMEM232C9JQI7 657 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 PRKAR2AP13861 404 aaKnown RBP23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 MCCP23508 829 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 ADORA2AP29274 412 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 ESR2Q92731 530 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 CHMP4CQ96CF2 233 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 DEFB118Q96PH6 123 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 HMX1Q9NP08 348 aaPredicted RBP23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 CTDP1Q9Y5B0 961 aaPredicted RBP23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 ZNF236Q9UL36 1845 aa23.86■■□□□ 1.41
HCFC1R1-202ENST00000354679 ZBED4O75132 1171 aa23.85■■□□□ 1.41
HCFC1R1-202ENST00000354679 SGPL1O95470 568 aa23.85■■□□□ 1.41
HCFC1R1-202ENST00000354679 COPB2P35606 906 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms