RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 ADAMTS4O75173 837 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 ZXDAP98168 799 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 KCNA10Q16322 511 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 CCDC57Q2TAC2 916 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 KSR2Q6VAB6 950 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 UMODL1Q5DID0 1318 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 PI4KAP2A4QPH2 592 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 ACTN1P12814 892 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 AKR1A1P14550 325 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 PICALMQ13492 652 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 SPRED2Q7Z698 418 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 PI4KAP1Q8N8J0 262 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
UBE2D3-205ENST00000350435 GPR179Q6PRD1 2367 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 CD4P01730 458 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 PFKMP08237 780 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 SIGLEC14Q08ET2 396 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 HERC6Q8IVU3 1022 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 SYNRGQ9UMZ2 1314 aa11.32□□□□□ -0.6
UBE2D3-205ENST00000350435 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 COBLO75128 1261 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 PPP2R1AP30153 589 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 CASP7P55210 303 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 PCSK9Q8NBP7 692 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 KLHDC9Q8NEP7 349 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 DLL3Q9NYJ7 618 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 MTUS1Q9ULD2 1270 aa11.31□□□□□ -0.6
UBE2D3-205ENST00000350435 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 LDHBP07195 334 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 ASGR1P07306 291 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 ASNSP08243 561 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 SCLYQ96I15 445 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 DDX4Q9NQI0 724 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
UBE2D3-205ENST00000350435 STXBP3O00186 592 aa11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 CTNNA3Q9UI47 895 aa11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
UBE2D3-205ENST00000350435 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 PRDX5P30044 214 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 FOXO4P98177 505 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 RRP1BQ14684 758 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 DEFB128Q7Z7B8 93 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 FRYLO94915 3013 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
UBE2D3-205ENST00000350435 LCHNA4D1U4 455 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 TIGD5Q53EQ6 642 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 VWCEQ96DN2 955 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 ASIC4Q96FT7 647 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 MROH5Q6ZUA9 1318 aa11.27□□□□□ -0.61
UBE2D3-205ENST00000350435 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 MBTPS2O43462 519 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 ZNF865P0CJ78 1059 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 ERVK-21P61565 698 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 PTPROQ16827 1216 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 ABRAQ8N0Z2 381 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 SHCBP1Q8NEM2 672 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 MRPL38Q96DV4 380 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms