RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NUP58Q9BVL2 599 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 IFIH1Q9BYX4 1025 aaKnown RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 PNMA2Q9UL42 364 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 SKOR1P84550 965 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 INPP5FQ9Y2H2 1132 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 GRM8O00222 908 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 COPS6Q7L5N1 327 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 C2CD5Q86YS7 1000 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 DDX17Q92841 729 aaKnown RBP17.99■□□□□ 0.47
PTCH1-201ENST00000331920 TRPC6Q9Y210 931 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 PCDHB13Q9Y5F0 798 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 GOLGA8CPA6NN73 597 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 MTX1Q13505 466 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 DPH5Q9H2P9 285 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 B4E1Z4 1266 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 SLC4A7Q9Y6M7 1214 aa17.99■□□□□ 0.47
PTCH1-201ENST00000331920 SNCBQ16143 134 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 SGK1O00141 431 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 FBXL13Q8NEE6 735 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 GLG1Q92896 1179 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 LIG3P49916 1009 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 LUC7L3O95232 432 aaKnown RBP17.98■□□□□ 0.47
PTCH1-201ENST00000331920 IGHDP01880 384 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 TRIM55Q9BYV6 548 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 CFBP00751 764 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 MAGEA1P43355 309 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 KRT80Q6KB66 452 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
PTCH1-201ENST00000331920 PALMDQ9NP74 551 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 HACD3Q9P035 362 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 MRFAP1Q9Y605 127 aa17.98■□□□□ 0.47
PTCH1-201ENST00000331920 MEIS3Q99687 375 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
PTCH1-201ENST00000331920 FAM8A1Q9UBU6 413 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
PTCH1-201ENST00000331920 PUM3Q15397 648 aaKnown RBP17.97■□□□□ 0.47
PTCH1-201ENST00000331920 CAPN11Q9UMQ6 739 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 FANCCQ00597 558 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 WDR48Q8TAF3 677 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 APOL6Q9BWW8 343 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 HEXIM1O94992 359 aaKnown RBP17.97■□□□□ 0.47
PTCH1-201ENST00000331920 STX1BP61266 288 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 MAIP1Q8WWC4 291 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 NRBF2Q96F24 287 aa17.97■□□□□ 0.47
PTCH1-201ENST00000331920 H7C0C1 242 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 ATP5OP48047 213 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 HSP90AA5PQ58FG0 334 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 MTRQ99707 1265 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 KCNH3Q9ULD8 1083 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 TEKT1Q969V4 418 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 GANCQ8TET4 914 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 DISC1Q9NRI5 854 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
PTCH1-201ENST00000331920 RLBP1P12271 317 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 POLE2P56282 527 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 TFCP2Q12800 502 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 SPATS2Q86XZ4 545 aaKnown RBP17.96■□□□□ 0.47
PTCH1-201ENST00000331920 MBD4O95243 580 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 HADHQ16836 314 aaKnown RBP17.96■□□□□ 0.47
PTCH1-201ENST00000331920 ZNF449Q6P9G9 518 aa17.96■□□□□ 0.47
PTCH1-201ENST00000331920 SH3BGRP55822 239 aaPredicted RBP17.96■□□□□ 0.46
PTCH1-201ENST00000331920 GRK7Q8WTQ7 553 aa17.96■□□□□ 0.46
PTCH1-201ENST00000331920 LARSQ9P2J5 1176 aaKnown RBP17.96■□□□□ 0.46
PTCH1-201ENST00000331920 TYW5A2RUC4 315 aaKnown RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 MAN1A2O60476 641 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 YWHAGP61981 247 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 STAMQ92783 540 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 A6NJR5 290 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 DKC1O60832 514 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 INHBAP08476 426 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 DLATP10515 647 aaKnown RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 GLE1Q53GS7 698 aaKnown RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 CDV3Q9UKY7 258 aaKnown RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 HIF1AQ16665 826 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 ZSCAN26Q16670 478 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 G3BP2Q9UN86 482 aaKnown RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 ATF2P15336 505 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 PPP1R2P41236 205 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 ART3Q13508 389 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 LRRC23Q53EV4 343 aaPredicted RBP17.95■□□□□ 0.46
PTCH1-201ENST00000331920 DEPTORQ8TB45 409 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 HOOK2Q96ED9 719 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 ZFYVE19Q96K21 471 aa17.95■□□□□ 0.46
PTCH1-201ENST00000331920 PDE1AP54750 535 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 NSMFQ6X4W1 530 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 ADKP55263 362 aaKnown RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 PDE1BQ01064 536 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 LZICQ8WZA0 190 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms