RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GJB1P08034 283 aa32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 FGRP09769 529 aa32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 GSPT1P15170 499 aaKnown RBP32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 TRMT44Q8IYL2 757 aaKnown RBP32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 MOV10L1Q9BXT6 1211 aaKnown RBP32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 UNC93B1Q9H1C4 597 aa32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 RLFQ13129 1914 aa32.73■■■□□ 2.83
ATPAF1-201ENST00000329231 SLC15A5A6NIM6 579 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 PLS1Q14651 629 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 SHCBP1Q8NEM2 672 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 TOMM22Q9NS69 142 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 FBXO28Q9NVF7 368 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 PPP1R9AQ9ULJ8 1098 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 ADAMTS5Q9UNA0 930 aa32.72■■■□□ 2.83
ATPAF1-201ENST00000329231 CENPBP07199 599 aaPredicted RBP32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 PTPREP23469 700 aa32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 LRRC47Q8N1G4 583 aaKnown RBP32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 GMCL1P1Q8NEA9 526 aa32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 NUP88Q99567 741 aaPredicted RBP32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 APBA2Q99767 749 aa32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 TACC3Q9Y6A5 838 aa32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 PLXNB2O15031 1838 aa32.71■■■□□ 2.83
ATPAF1-201ENST00000329231 GJA8P48165 433 aa32.7■■■□□ 2.83
ATPAF1-201ENST00000329231 HAND2P61296 217 aa32.7■■■□□ 2.83
ATPAF1-201ENST00000329231 MAP2K5Q13163 448 aa32.7■■■□□ 2.83
ATPAF1-201ENST00000329231 A0A0G2JMZ2 1700 aa32.69■■■□□ 2.82
ATPAF1-201ENST00000329231 PCP11498 1178 aaKnown RBP32.69■■■□□ 2.82
ATPAF1-201ENST00000329231 TRIB2Q92519 343 aa32.69■■■□□ 2.82
ATPAF1-201ENST00000329231 SLF1Q9BQI6 1058 aa32.69■■■□□ 2.82
ATPAF1-201ENST00000329231 VWA5AO00534 786 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 STRNO43815 780 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 ZKSCAN1P17029 563 aaPredicted RBP32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 ERCC3P19447 782 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 GRB14Q14449 540 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 TMEM132BQ14DG7 1078 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 RRP12Q5JTH9 1297 aaKnown RBP32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 MROH8Q9H579 483 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 IL17RBQ9NRM6 502 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 STX8Q9UNK0 236 aa32.68■■■□□ 2.82
ATPAF1-201ENST00000329231 MYH4Q9Y623 1939 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 AKNAD1Q5T1N1 836 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 SLFN13Q68D06 897 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 MFSD6Q6ZSS7 791 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 DSCC1Q9BVC3 393 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 RNF41Q9H4P4 317 aaPredicted RBP32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 BRCA2P51587 3418 aa32.67■■■□□ 2.82
ATPAF1-201ENST00000329231 ZNF213O14771 459 aa32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 SLC25A27O95847 323 aa32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 NCAPG2Q86XI2 1143 aa32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 PRPF38AQ8NAV1 312 aaKnown RBP32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 U2AF1L4Q8WU68 220 aaKnown RBP32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 STAG1Q8WVM7 1258 aa32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 PAK6Q9NQU5 681 aaPredicted RBP32.66■■■□□ 2.82
ATPAF1-201ENST00000329231 PARP14Q460N5 1801 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 NMT2O60551 498 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 CAPN2P17655 700 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 SHISA4Q96DD7 197 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 HMX1Q9NP08 348 aaPredicted RBP32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 FEM1BQ9UK73 627 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 RPTORQ8N122 1335 aa32.65■■■□□ 2.82
ATPAF1-201ENST00000329231 SGPL1O95470 568 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 HOXC6P09630 235 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 TRIM32Q13049 653 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 RIOX2Q8IUF8 465 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 RUFY2Q8WXA3 655 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 NBPF3Q9H094 633 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 CTNNA3Q9UI47 895 aa32.64■■■□□ 2.82
ATPAF1-201ENST00000329231 RAD50Q92878 1312 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 BMP3P12645 472 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 STAT3P40763 770 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 CENPQQ7L2Z9 268 aaPredicted RBP32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 TBC1D10CQ8IV04 446 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 GMCL1Q96IK5 515 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 DEFB118Q96PH6 123 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 TCP11L1Q9NUJ3 509 aa32.63■■■□□ 2.81
ATPAF1-201ENST00000329231 PRKAR2AP13861 404 aaKnown RBP32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 COPB2P35606 906 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 NOVP48745 357 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 CCL14Q16627 93 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 MAP3K21Q5TCX8 1036 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 DPP9Q86TI2 863 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 ABRAQ8N0Z2 381 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 REPS2Q8NFH8 660 aa32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 ZNF214Q9UL59 606 aaPredicted RBP32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 CTDP1Q9Y5B0 961 aaPredicted RBP32.62■■■□□ 2.81
ATPAF1-201ENST00000329231 ADORA2AP29274 412 aa32.61■■■□□ 2.81
ATPAF1-201ENST00000329231 SLC1A4P43007 532 aa32.61■■■□□ 2.81
ATPAF1-201ENST00000329231 NT5C2P49902 561 aa32.61■■■□□ 2.81
ATPAF1-201ENST00000329231 KIFC2Q96AC6 838 aa32.61■■■□□ 2.81
ATPAF1-201ENST00000329231 ISY1Q9ULR0 285 aaKnown RBP32.61■■■□□ 2.81
ATPAF1-201ENST00000329231 ZBED4O75132 1171 aa32.6■■■□□ 2.81
ATPAF1-201ENST00000329231 CHMLP26374 656 aa32.6■■■□□ 2.81
ATPAF1-201ENST00000329231 IMMTQ16891 758 aaKnown RBP32.6■■■□□ 2.81
ATPAF1-201ENST00000329231 SLC5A4Q9NY91 659 aa32.6■■■□□ 2.81
ATPAF1-201ENST00000329231 TFRCP02786 760 aaKnown RBP32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 NEFLP07196 543 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 FCER1AP12319 257 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 MCCP23508 829 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 MFSD14CQ5VZR4 134 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms