RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
LDLRAD3-201ENST00000315571 BBOX1O75936 387 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 CHRNA5P30532 468 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 SLC8A1P32418 973 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 IQCB1Q15051 598 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 TMEM165Q9HC07 324 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 SGSM2O43147 1006 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 TAF5LO75529 589 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 PDE8BO95263 885 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 LARGE1O95461 756 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 CCDC175P0C221 793 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 LRRC23Q53EV4 343 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 CAPZA3Q96KX2 299 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 C21orf2O43822 256 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 ZNF202O95125 648 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 STK38Q15208 465 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 MINPP1Q9UNW1 487 aa13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD3-201ENST00000315571 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 PDHBP11177 359 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 CDC25CP30307 473 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 TIMM10P62072 90 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 PDCLQ13371 301 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 PNKPQ96T60 521 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 ANKIB1Q9P2G1 1089 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 ECEL1O95672 775 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 MCM3P25205 808 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 PPFIA1Q13136 1202 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 ODF2Q5BJF6 829 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 HHATQ5VTY9 493 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 MYSM1Q5VVJ2 828 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 OSBPL5Q9H0X9 879 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 L1RE1Q9UN81 338 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 MAP2K7O14733 419 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 SLC5A1P13866 664 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 GGCXP38435 758 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 KCTD16Q68DU8 428 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
LDLRAD3-201ENST00000315571 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 LAMB3Q13751 1172 aa13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 ZC3H12AQ5D1E8 599 aaKnown RBP13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 RMI1Q9H9A7 625 aa13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 TPX2Q9ULW0 747 aaKnown RBP13.08□□□□□ -0.31
LDLRAD3-201ENST00000315571 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 USP4Q13107 963 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 PARP9Q8IXQ6 854 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 PYGLP06737 847 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 TSC22D3Q99576 134 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 CDC23Q9UJX2 597 aa13.08□□□□□ -0.32
LDLRAD3-201ENST00000315571 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 C3orf20Q8ND61 904 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 LPIN2Q92539 896 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 LRRIQ3A6PVS8 624 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 TUBBP07437 444 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 PPP1R7Q15435 360 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 BLOC1S2Q6QNY1 142 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 ARL10Q8N8L6 244 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 LRP5O75197 1615 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 OPA1O60313 960 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 CUTAO60888 179 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 CLTAP09496 248 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 ZNF396Q96N95 335 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 PPANQ9NQ55 473 aaKnown RBP13.07□□□□□ -0.32
LDLRAD3-201ENST00000315571 ZNF609O15014 1411 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms