RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 SSRP1Q08945 709 aaKnown RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 FUT2Q10981 343 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 FAM184AQ8NB25 1140 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 ZNF280CQ8ND82 737 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 KIAA1683Q9H0B3 1180 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-201ENST00000315491 ZHX2Q9Y6X8 837 aa18.73■□□□□ 0.59
TUBB3-201ENST00000315491 STK36Q9NRP7 1315 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 FDPSP14324 419 aaKnown RBP18.72■□□□□ 0.59
TUBB3-201ENST00000315491 FKBP1BP68106 108 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 SPP2Q13103 211 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 ZYXQ15942 572 aaKnown RBP18.72■□□□□ 0.59
TUBB3-201ENST00000315491 TRIM22Q8IYM9 498 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 CNTNAP5Q8WYK1 1306 aa18.72■□□□□ 0.59
TUBB3-201ENST00000315491 USP17L10C9JJH3 530 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 CELF2O95319 508 aaKnown RBP18.71■□□□□ 0.59
TUBB3-201ENST00000315491 LDLRAD1Q5T700 205 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 KCTD1Q719H9 257 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 RNF26Q9BY78 433 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-201ENST00000315491 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 GBA2Q9HCG7 927 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-201ENST00000315491 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
TUBB3-201ENST00000315491 CIZ1Q9ULV3 898 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-201ENST00000315491 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
TUBB3-201ENST00000315491 BMP3P12645 472 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 USP14P54578 494 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 MTMR2Q13614 643 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 CLMNQ96JQ2 1002 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 UNCXA6NJT0 531 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 PRPF3O43395 683 aaKnown RBP18.7■□□□□ 0.58
TUBB3-201ENST00000315491 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 BACE1P56817 501 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 AKAP17AQ02040 695 aaKnown RBP18.7■□□□□ 0.58
TUBB3-201ENST00000315491 SLC35G1Q2M3R5 365 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 C2orf69Q8N8R5 385 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
TUBB3-201ENST00000315491 SPZ1Q9BXG8 430 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 AFG3L2Q9Y4W6 797 aa18.7■□□□□ 0.58
TUBB3-201ENST00000315491 TRIM75PA6NK02 468 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 CYTH3O43739 400 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 TTBK2Q6IQ55 1244 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 ERO1BQ86YB8 467 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 LPAR1Q92633 364 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
TUBB3-201ENST00000315491 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 C19orf81C9J6K1 198 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 DEXIO95424 95 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 PDCP20941 246 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 PPATQ06203 517 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 FAM83BQ5T0W9 1011 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 LARP1BQ659C4 914 aaKnown RBP18.68■□□□□ 0.58
TUBB3-201ENST00000315491 WASF1Q92558 559 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 V9GY48 417 aaPredicted RBP18.68■□□□□ 0.58
TUBB3-201ENST00000315491 SYT1P21579 422 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 ALG1Q9BT22 464 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 RIOX1Q9H6W3 641 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 EMILIN3Q9NT22 766 aa18.68■□□□□ 0.58
TUBB3-201ENST00000315491 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
TUBB3-201ENST00000315491 PHIPQ8WWQ0 1821 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 hCG_1642624A0A1W2PR95 340 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
TUBB3-201ENST00000315491 NUCB2P80303 420 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 DGKZQ13574 1117 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 CST9Q5W186 159 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 OTUD5Q96G74 571 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 C12orf42Q96LP6 360 aa18.67■□□□□ 0.58
TUBB3-201ENST00000315491 STX6O43752 255 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 YY1P25490 414 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 SLC16A2P36021 539 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 PKN1Q16512 942 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
TUBB3-201ENST00000315491 PIBF1Q8WXW3 757 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 AIFM3Q96NN9 605 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 PASKQ96RG2 1323 aa18.66■□□□□ 0.58
TUBB3-201ENST00000315491 PDIA4P13667 645 aaKnown RBP18.65■□□□□ 0.58
TUBB3-201ENST00000315491 FOSBP53539 338 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 HMGCS2P54868 508 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-201ENST00000315491 PPIL2Q13356 520 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 PKP1Q13835 747 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 SH3D19Q5HYK7 790 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 BTNL9Q6UXG8 535 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 ADGRF4Q8IZF3 695 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 OPTNQ96CV9 577 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 SLC10A4Q96EP9 437 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms