RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 GSDMAQ96QA5 445 aa18.73■□□□□ 0.59
SSH3-201ENST00000308127 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
SSH3-201ENST00000308127 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
SSH3-201ENST00000308127 BAZ2AQ9UIF9 1905 aaKnown RBP18.73■□□□□ 0.59
SSH3-201ENST00000308127 CTAGE15A4D2H0 777 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 NKRFO15226 690 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSH3-201ENST00000308127 CTAGE8P0CG41 777 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 PAK1Q13153 545 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 GPS2Q13227 327 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 CTAGE6Q86UF2 777 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 CTAGE4Q8IX94 777 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 ELOA2Q8IYF1 753 aaPredicted RBP18.72■□□□□ 0.59
SSH3-201ENST00000308127 CEP112Q8N8E3 955 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 ZNF384Q8TF68 577 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 RIN2Q8WYP3 895 aaPredicted RBP18.72■□□□□ 0.59
SSH3-201ENST00000308127 MYH6P13533 1939 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 TTC26A0AVF1 554 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 LRRIQ3A6PVS8 624 aaPredicted RBP18.72■□□□□ 0.59
SSH3-201ENST00000308127 MAP2K7O14733 419 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 GNAT2P19087 354 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
SSH3-201ENST00000308127 BRD3Q15059 726 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 TCP11X2Q5H9J9 407 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 SLC51AQ86UW1 340 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
SSH3-201ENST00000308127 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 TNNT3P45378 269 aaPredicted RBP18.71■□□□□ 0.59
SSH3-201ENST00000308127 E2F4Q16254 413 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 FKBP15Q5T1M5 1219 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 IQUBQ8NA54 791 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 CPVLQ9H3G5 476 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 FAM193AP78312 1265 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 CASP8Q14790 479 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 PDXDC2PQ6P474 469 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 IQCA1Q86XH1 822 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 L1RE1Q9UN81 338 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 DUSP10Q9Y6W6 482 aa18.71■□□□□ 0.59
SSH3-201ENST00000308127 STRCP1A6NGW2 1772 aa18.71■□□□□ 0.58
SSH3-201ENST00000308127 COL4A1P02462 1669 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 PRPF3O43395 683 aaKnown RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 ATP1A1P05023 1023 aaKnown RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 TMTC3Q6ZXV5 915 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 HDXQ7Z353 690 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 TNFRSF25Q93038 417 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 RIOK1Q9BRS2 568 aaKnown RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 ZNF185O15231 689 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 RPN1P04843 607 aaKnown RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 FERMT2Q96AC1 680 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 NAA15Q9BXJ9 866 aaKnown RBP18.7■□□□□ 0.58
SSH3-201ENST00000308127 RABEP2Q9H5N1 569 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 MYO6Q9UM54 1294 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
SSH3-201ENST00000308127 CYP27A1Q02318 531 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 CTR9Q6PD62 1173 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 CYP26C1Q6V0L0 522 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 IRF2BP1Q8IU81 584 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 HPS3Q969F9 1004 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 AK7Q96M32 723 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 DRC1Q96MC2 740 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 MMS19Q96T76 1030 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 FEZ2Q9UHY8 353 aaPredicted RBP18.69■□□□□ 0.58
SSH3-201ENST00000308127 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
SSH3-201ENST00000308127 STAT6P42226 847 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 TMTC1Q8IUR5 882 aa18.69■□□□□ 0.58
SSH3-201ENST00000308127 CTCFLQ8NI51 663 aaPredicted RBP18.69■□□□□ 0.58
SSH3-201ENST00000308127 EPN1Q9Y6I3 576 aaPredicted RBP18.69■□□□□ 0.58
SSH3-201ENST00000308127 TULP2O00295 520 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
SSH3-201ENST00000308127 CCDC152Q4G0S7 254 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 AGPAT5Q9NUQ2 364 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 MYH3P11055 1940 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 RCCD1A6NED2 376 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 B4DLN1 442 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 NDUFA10O95299 355 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 STAG2Q8N3U4 1231 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 PSMB7Q99436 277 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 PAPPAQ13219 1627 aa18.68■□□□□ 0.58
SSH3-201ENST00000308127 MACROD2A1Z1Q3 448 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 TYW1BQ6NUM6 668 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
SSH3-201ENST00000308127 PCMTD1Q96MG8 357 aaPredicted RBP18.67■□□□□ 0.58
SSH3-201ENST00000308127 TMEM60Q9H2L4 133 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 LIMA1Q9UHB6 759 aaKnown RBP18.67■□□□□ 0.58
SSH3-201ENST00000308127 COL1A1P02452 1464 aaPredicted RBP18.67■□□□□ 0.58
SSH3-201ENST00000308127 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 ATP6V1AP38606 617 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 MSANTD4Q8NCY6 345 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 LRRC15Q8TF66 581 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 GNL3LQ9NVN8 582 aaKnown RBP18.67■□□□□ 0.58
SSH3-201ENST00000308127 NID2Q14112 1375 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 ERLIN1O75477 346 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms