RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 LSM14BQ9BX40 385 aaKnown RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 GPBP1Q86WP2 473 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 IFT20Q8IY31 132 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 SMAP1Q8IYB5 467 aaPredicted RBP18.17■□□□□ 0.5
BRD3-201ENST00000303407 LCORLQ8N3X6 602 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 ARFGAP2Q8N6H7 521 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 IQCDQ96DY2 449 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
BRD3-201ENST00000303407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
BRD3-201ENST00000303407 PRKAB2O43741 272 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 GNA14O95837 355 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 STRN3Q13033 797 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRD3-201ENST00000303407 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
BRD3-201ENST00000303407 UTP11Q9Y3A2 253 aaKnown RBP18.16■□□□□ 0.5
BRD3-201ENST00000303407 KIF23Q02241 960 aaPredicted RBP18.16■□□□□ 0.5
BRD3-201ENST00000303407 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRD3-201ENST00000303407 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 ADGRL3Q9HAR2 1447 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 SEMA3EO15041 775 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 LONP1P36776 959 aaKnown RBP18.16■□□□□ 0.5
BRD3-201ENST00000303407 SPATA1Q5VX52 437 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 C2CD5Q86YS7 1000 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 TTC14Q96N46 770 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 PDE6BP35913 854 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 SCNN1DP51172 638 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 MICALL1Q8N3F8 863 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 UBL4BQ8N7F7 174 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 TSC1Q92574 1164 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 EXOC3O60645 756 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 TPH2Q8IWU9 490 aa18.16■□□□□ 0.5
BRD3-201ENST00000303407 ZBED4O75132 1171 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 RESTQ13127 1097 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 CPLX4Q7Z7G2 160 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 KCNK9Q9NPC2 374 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 PNPLA6Q8IY17 1366 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
BRD3-201ENST00000303407 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
BRD3-201ENST00000303407 DOK7Q18PE1 504 aa18.15■□□□□ 0.5
BRD3-201ENST00000303407 RNF26Q9BY78 433 aaPredicted RBP18.15■□□□□ 0.5
BRD3-201ENST00000303407 H7C1W4 665 aa18.14■□□□□ 0.5
BRD3-201ENST00000303407 PIH1D3Q9NQM4 214 aaKnown RBP18.14■□□□□ 0.5
BRD3-201ENST00000303407 TSKSQ9UJT2 592 aa18.14■□□□□ 0.5
BRD3-201ENST00000303407 NRKQ7Z2Y5 1582 aa18.14■□□□□ 0.5
BRD3-201ENST00000303407 MNAT1P51948 309 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 OR8K1Q8NGG5 319 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
BRD3-201ENST00000303407 CEP104O60308 925 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 PRR16Q569H4 304 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 PANK4Q9NVE7 773 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 DPCR1Q3MIW9 517 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 C6orf163Q5TEZ5 329 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 OTUD6BQ8N6M0 293 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 LINC00301Q8NCQ3 95 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 PIGBQ92521 554 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 H7C1D1 291 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 DKC1O60832 514 aaKnown RBP eCLIP18.14■□□□□ 0.49
BRD3-201ENST00000303407 FLOT1O75955 427 aa18.14■□□□□ 0.49
BRD3-201ENST00000303407 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.14■□□□□ 0.49
BRD3-201ENST00000303407 ERVV-1B6SEH8 477 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 HPDP32754 393 aaPredicted RBP18.13■□□□□ 0.49
BRD3-201ENST00000303407 DLGAP5Q15398 846 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 CTTNBP2NLQ9P2B4 639 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 PCDHA4Q9UN74 947 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 XDHP47989 1333 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 MMP1P03956 469 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 APBA3O96018 575 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 IGKV5-2P06315 115 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 CFAP221Q4G0U5 840 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 LIN9Q5TKA1 542 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 MAK16Q9BXY0 300 aaKnown RBP18.13■□□□□ 0.49
BRD3-201ENST00000303407 COBLO75128 1261 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 RCOR1Q9UKL0 485 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
BRD3-201ENST00000303407 DNM2P50570 870 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SLFN12Q8IYM2 578 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SREK1Q8WXA9 508 aaKnown RBP18.12■□□□□ 0.49
BRD3-201ENST00000303407 PCDHA12Q9UN75 941 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 A0A087WWV3 80 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SYCE1Q8N0S2 351 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 GPR161Q8N6U8 529 aaKnown RBP18.12■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA6CA6NDK9 693 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 GAS7O60861 476 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA6DP0CG33 693 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 WHAMMP3Q1A5X7 153 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms