RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 NRBP1Q9UHY1 535 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 SUGT1Q9Y2Z0 365 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 TFAP4Q01664 338 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 ICA1Q05084 483 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CNGA4Q8IV77 575 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 LRRC8AQ8IWT6 810 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CTNNBL1Q8WYA6 563 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CABS1Q96KC9 395 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 A6NNZ2 444 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 B4E1Z4 1266 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 NTSR2O95665 410 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 LACTBP83111 547 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 TUBB8Q3ZCM7 444 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
NPC1L1-201ENST00000289547 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 CRKP46108 304 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PPARDQ03181 441 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 ZBTB22O15209 634 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PRDM1O75626 825 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PCK1P35558 622 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 BAIAP2L1Q9UHR4 511 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 IDEP14735 1019 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 ACTN2P35609 894 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 MACROD2A1Z1Q3 448 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 AMPD3Q01432 767 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 AKNAD1Q5T1N1 836 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 GPR101Q96P66 508 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
NPC1L1-201ENST00000289547 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 UBA7P41226 1012 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 IGSF22Q8N9C0 903 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 PAIP2Q9BPZ3 127 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 DBNLQ9UJU6 430 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 SASH1O94885 1247 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 PDE11AQ9HCR9 933 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 COL14A1Q05707 1796 aaKnown RBP12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 MYO1CO00159 1063 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 PEX19P40855 299 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 NT5C2P49902 561 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 ICE2Q659A1 982 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 DHX58Q96C10 678 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
NPC1L1-201ENST00000289547 CETN2P41208 172 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 AP1ARQ63HQ0 302 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.384e-8■■□□□ 12.2
NPC1L1-201ENST00000289547 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 SNX14Q9Y5W7 946 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 NOD1Q9Y239 953 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 RGS12O14924 1447 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 UBXN1Q04323 297 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 NCBP1Q09161 790 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms