RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 ATN1P54259 1190 aaPredicted RBP18.3■□□□□ 0.52
SOD1-201ENST00000270142 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
SOD1-201ENST00000270142 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 FAM83BQ5T0W9 1011 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 GJC2Q5T442 439 aaPredicted RBP18.3■□□□□ 0.52
SOD1-201ENST00000270142 APPBP2Q92624 585 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 MAML3Q96JK9 1138 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 SLC5A4Q9NY91 659 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
SOD1-201ENST00000270142 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
SOD1-201ENST00000270142 SEPT4O43236 478 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 RAD21O60216 631 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 SLC25A27O95847 323 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 RASA1P20936 1047 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 LRIT3Q3SXY7 679 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 RIOX2Q8IUF8 465 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 EPB41L4AQ9HCS5 686 aaPredicted RBP18.29■□□□□ 0.52
SOD1-201ENST00000270142 ROBO3Q96MS0 1386 aa18.29■□□□□ 0.52
SOD1-201ENST00000270142 MINDY4BA8MYZ0 360 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 VWA5AO00534 786 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
SOD1-201ENST00000270142 GPAA1O43292 621 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 FCER1AP12319 257 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 GIMAP6Q6P9H5 292 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 MMP19Q99542 508 aa18.28■□□□□ 0.52
SOD1-201ENST00000270142 M0R2C6 588 aa18.27■□□□□ 0.52
SOD1-201ENST00000270142 STAT3P40763 770 aa18.27■□□□□ 0.52
SOD1-201ENST00000270142 RTP1P59025 263 aa18.27■□□□□ 0.52
SOD1-201ENST00000270142 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
SOD1-201ENST00000270142 MKNK2Q9HBH9 465 aa18.27■□□□□ 0.52
SOD1-201ENST00000270142 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
SOD1-201ENST00000270142 COL11A1P12107 1806 aaPredicted RBP18.27■□□□□ 0.52
SOD1-201ENST00000270142 PGK2P07205 417 aa18.26■□□□□ 0.51
SOD1-201ENST00000270142 ARRDC4Q8NCT1 418 aa18.26■□□□□ 0.51
SOD1-201ENST00000270142 NYAP2Q9P242 653 aa18.26■□□□□ 0.51
SOD1-201ENST00000270142 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 NDUFB10O96000 172 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
SOD1-201ENST00000270142 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
SOD1-201ENST00000270142 TDO2P48775 406 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 GPR153Q6NV75 609 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
SOD1-201ENST00000270142 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 F5H6K3 240 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 PRDM1O75626 825 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 GNAT2P19087 354 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 KLRC3Q07444 240 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 KCTD2Q14681 263 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 LRRC41Q15345 812 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 SLC39A5Q6ZMH5 540 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 Q7L0L9 218 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 PCDHB15Q9Y5E8 787 aa18.24■□□□□ 0.51
SOD1-201ENST00000270142 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 APPP05067 770 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 COPB2P35606 906 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 IFNL3Q8IZI9 196 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 DEFB123Q8N688 67 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
SOD1-201ENST00000270142 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
SOD1-201ENST00000270142 LBHD1Q9BQE6 289 aaPredicted RBP18.23■□□□□ 0.51
SOD1-201ENST00000270142 TINF2Q9BSI4 451 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 CLIP2Q9UDT6 1046 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
SOD1-201ENST00000270142 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
SOD1-201ENST00000270142 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
SOD1-201ENST00000270142 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
SOD1-201ENST00000270142 ADCYAP1R1P41586 468 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 SNX17Q15036 470 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 SNRNP48Q6IEG0 339 aaKnown RBP18.22■□□□□ 0.51
SOD1-201ENST00000270142 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
SOD1-201ENST00000270142 CEP95Q96GE4 821 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 TEX13BQ9BXU2 312 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 PRKAG2Q9UGJ0 569 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 DNAH12Q6ZR08 3092 aa18.22■□□□□ 0.51
SOD1-201ENST00000270142 ERC2O15083 957 aa18.21■□□□□ 0.51
SOD1-201ENST00000270142 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
SOD1-201ENST00000270142 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
SOD1-201ENST00000270142 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
SOD1-201ENST00000270142 XPNPEP3Q9NQH7 507 aa18.21■□□□□ 0.51
SOD1-201ENST00000270142 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
SOD1-201ENST00000270142 COL6A3P12111 3177 aa18.21■□□□□ 0.51
SOD1-201ENST00000270142 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
SOD1-201ENST00000270142 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 RARBP10826 455 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
SOD1-201ENST00000270142 PRPF38AQ8NAV1 312 aaKnown RBP18.2■□□□□ 0.5
SOD1-201ENST00000270142 MKL1Q969V6 931 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
SOD1-201ENST00000270142 LENG1Q96BZ8 264 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms